Available Tools

ToolUniverse provides over 600 scientific tools organized into local and remote categories. This overview helps you discover and navigate the available tools for your research needs.

Tool Registry

Local Tools

Local tools are Python classes that run within the ToolUniverse process, providing high performance and seamless integration.

Key Features: - High performance with no network overhead - Automatic discovery and registration - Full access to ToolUniverse features - Easy development and testing

Remote Tools

Remote tools integrate external services, APIs, and specialized systems running on different servers.

Key Features: - Integration with external APIs and services - Scalable computation offloading - Support for different programming languages - Secure isolation of sensitive operations

Tip

Discover Available Tools:

• Tool Listing Tutorial - Browse tools by category and explore the full catalog

• Tool Finder Tutorial - Learn advanced search techniques and filters

• Remote Tools Setup - Set up remote tool integrations

• Tool Loading Tutorial - Load and configure local tools

Overview

• Total Configuration Files: 63

• Total Tools: 651

Local Tools

Note

Tools running within the ToolUniverse process

Packages Tools

• Bioinformatics Core Tools

• Cheminformatics Tools

• Earth Sciences Tools

• Genomics Tools

• Image Processing Tools

• Machine Learning Tools

• Neuroscience Tools

• Physics Astronomy Tools

• Scientific Computing Tools

• Single Cell Tools

• Structural Biology Tools

• Visualization Tools

Builtin Tools

• Admetai Tools

• Adverse Event Tools

• Agentic Tools

• Alphafold Tools

• Boltz Tools

• Chembl Tools

• Clinicaltrials Gov Tools

• Compose Tools

• Dailymed Tools

• Dataset Tools

• Disease Target Score Tools

• Efo Tools

• Embedding Tools

• Enrichr Tools

• Europe Pmc Tools

• Expert Feedback Tools

• Fda Drug Adverse Event Tools

• Fda Drug Labeling Tools

• Finder Tools

• Gene Ontology Tools

• Gwas Tools

• Hpa Tools

• Humanbase Tools

• Idmap Tools

• Mcp Client Tools Example

• Medlineplus Tools

• Monarch Tools

• Odphp Tools

• Openalex Tools

• Opentarget Tools

• Output Summarization Tools

• Pubchem Tools

• Pubtator Tools

• Rcsb Pdb Tools

• Reactome Tools

• Semantic Scholar Tools

• Special Tools

• Tool Composition Tools

• Txagent Client Tools

• Uniprot Tools

• Url Fetch Tools

• Uspto Downloader Tools

• Uspto Tools

• Xml Tools

Remote Tools

Note

Tools registered in with remote registry

---

• Boltz Tools
• Depmap Tools
• Expert Feedback Tools
• Immune Compass Tools
• Pinnacle Tools
• Transcriptformer Tools
• Uspto Downloader Tools

Tools by Type

ADMETAITool (9 tools)

Local Tools:

• ADMETAI_predict_BBB_penetrance (from Admetai Tools)

• ADMETAI_predict_CYP_interactions (from Admetai Tools)

• ADMETAI_predict_bioavailability (from Admetai Tools)

• ADMETAI_predict_clearance_distribution (from Admetai Tools)

• ADMETAI_predict_nuclear_receptor_activity (from Admetai Tools)

• ADMETAI_predict_physicochemical_properties (from Admetai Tools)

• ADMETAI_predict_solubility_lipophilicity_hydration (from Admetai Tools)

• ADMETAI_predict_stress_response (from Admetai Tools)

• ADMETAI_predict_toxicity (from Admetai Tools)

AgenticTool (38 tools)

Local Tools:

• AdvancedCodeQualityAnalyzer (from Agentic Tools)

• AdverseEventICDMapper (from Adverse Event Tools)

• AdverseEventPredictionQuestionGenerator (from Adverse Event Tools)

• AdverseEventPredictionQuestionGeneratorWithContext (from Adverse Event Tools)

• ArgumentDescriptionOptimizer (from Agentic Tools)

• CodeOptimizer (from Agentic Tools)

• CodeQualityAnalyzer (from Agentic Tools)

• DataAnalysisValidityReviewer (from Agentic Tools)

• DescriptionAnalyzer (from Agentic Tools)

• DescriptionQualityEvaluator (from Agentic Tools)

• DomainExpertValidator (from Agentic Tools)

• EthicalComplianceReviewer (from Agentic Tools)

• ExperimentalDesignScorer (from Agentic Tools)

• HypothesisGenerator (from Agentic Tools)

• LabelGenerator (from Agentic Tools)

• LiteratureContextReviewer (from Agentic Tools)

• MedicalLiteratureReviewer (from Agentic Tools)

• MedicalTermNormalizer (from Agentic Tools)

• MethodologyRigorReviewer (from Agentic Tools)

• NoveltySignificanceReviewer (from Agentic Tools)

• ProtocolOptimizer (from Agentic Tools)

• QuestionRephraser (from Agentic Tools)

• ReproducibilityTransparencyReviewer (from Agentic Tools)

• ResultsInterpretationReviewer (from Agentic Tools)

• ScientificTextSummarizer (from Agentic Tools)

• TestCaseGenerator (from Agentic Tools)

• ToolCompatibilityAnalyzer (from Tool Composition Tools)

• ToolImplementationGenerator (from Agentic Tools)

• ToolMetadataGenerator (from Agentic Tools)

• ToolMetadataStandardizer (from Agentic Tools)

• ToolOptimizer (from Agentic Tools)

• ToolOutputSummarizer (from Output Summarization Tools)

• ToolQualityEvaluator (from Agentic Tools)

• ToolRelationshipDetector (from Agentic Tools)

• ToolSpecificationGenerator (from Agentic Tools)

• ToolSpecificationOptimizer (from Agentic Tools)

• WritingPresentationReviewer (from Agentic Tools)

• call_agentic_human (from Agentic Tools)

AlphaFoldRESTTool (3 tools)

Local Tools:

• alphafold_get_annotations (from Alphafold Tools)

• alphafold_get_prediction (from Alphafold Tools)

• alphafold_get_summary (from Alphafold Tools)

ChEMBLTool (1 tools)

Local Tools:

• ChEMBL_search_similar_molecules (from Chembl Tools)

ClinicalTrialsDetailsTool (9 tools)

Local Tools:

• extract_clinical_trial_adverse_events (from Clinicaltrials Gov Tools)

• extract_clinical_trial_outcomes (from Clinicaltrials Gov Tools)

• get_clinical_trial_conditions_and_interventions (from Clinicaltrials Gov Tools)

• get_clinical_trial_descriptions (from Clinicaltrials Gov Tools)

• get_clinical_trial_eligibility_criteria (from Clinicaltrials Gov Tools)

• get_clinical_trial_locations (from Clinicaltrials Gov Tools)

• get_clinical_trial_outcome_measures (from Clinicaltrials Gov Tools)

• get_clinical_trial_references (from Clinicaltrials Gov Tools)

• get_clinical_trial_status_and_dates (from Clinicaltrials Gov Tools)

ClinicalTrialsSearchTool (1 tools)

Local Tools:

• search_clinical_trials (from Clinicaltrials Gov Tools)

ComposeTool (10 tools)

Local Tools:

• BiomarkerDiscoveryWorkflow (from Compose Tools)

• ComprehensiveDrugDiscoveryPipeline (from Compose Tools)

• DrugSafetyAnalyzer (from Compose Tools)

• LiteratureSearchTool (from Compose Tools)

• OutputSummarizationComposer (from Output Summarization Tools)

• ToolDescriptionOptimizer (from Compose Tools)

• ToolDiscover (from Compose Tools)

• ToolGraphComposer (from Tool Composition Tools)

• ToolGraphGenerationPipeline (from Compose Tools)

• ToolMetadataGenerationPipeline (from Compose Tools)

DatasetTool (7 tools)

Local Tools:

• dict_search (from Dataset Tools)

• dili_search (from Dataset Tools)

• diqt_search (from Dataset Tools)

• drugbank_full_search (from Dataset Tools)

• drugbank_links_search (from Dataset Tools)

• drugbank_vocab_filter (from Dataset Tools)

• drugbank_vocab_search (from Dataset Tools)

DiseaseTargetScoreTool (10 tools)

Local Tools:

• cancer_biomarkers_disease_target_score (from Disease Target Score Tools)

• cancer_gene_census_disease_target_score (from Disease Target Score Tools)

• chembl_disease_target_score (from Disease Target Score Tools)

• disease_target_score (from Disease Target Score Tools)

• europepmc_disease_target_score (from Disease Target Score Tools)

• eva_disease_target_score (from Disease Target Score Tools)

• eva_somatic_disease_target_score (from Disease Target Score Tools)

• expression_atlas_disease_target_score (from Disease Target Score Tools)

• genomics_england_disease_target_score (from Disease Target Score Tools)

• reactome_disease_target_score (from Disease Target Score Tools)

EFOTool (1 tools)

Local Tools:

• OSL_get_efo_id_by_disease_name (from Efo Tools)

EmbeddingDatabase (4 tools)

Local Tools:

• embedding_database_add (from Embedding Tools)

• embedding_database_create (from Embedding Tools)

• embedding_database_load (from Embedding Tools)

• embedding_database_search (from Embedding Tools)

EmbeddingSync (2 tools)

Local Tools:

• embedding_sync_download (from Embedding Tools)

• embedding_sync_upload (from Embedding Tools)

EnrichrTool (1 tools)

Local Tools:

• enrichr_gene_enrichment_analysis (from Enrichr Tools)

EuropePMCTool (1 tools)

Local Tools:

• EuropePMC_search_articles (from Europe Pmc Tools)

FDACountAdditiveReactionsTool (6 tools)

Local Tools:

• FAERS_count_additive_administration_routes (from Fda Drug Adverse Event Tools)

• FAERS_count_additive_adverse_reactions (from Fda Drug Adverse Event Tools)

• FAERS_count_additive_event_reports_by_country (from Fda Drug Adverse Event Tools)

• FAERS_count_additive_reaction_outcomes (from Fda Drug Adverse Event Tools)

• FAERS_count_additive_reports_by_reporter_country (from Fda Drug Adverse Event Tools)

• FAERS_count_additive_seriousness_classification (from Fda Drug Adverse Event Tools)

FDADrugAdverseEventTool (9 tools)

Local Tools:

• FAERS_count_country_by_drug_event (from Fda Drug Adverse Event Tools)

• FAERS_count_death_related_by_drug (from Fda Drug Adverse Event Tools)

• FAERS_count_drug_routes_by_event (from Fda Drug Adverse Event Tools)

• FAERS_count_drugs_by_drug_event (from Fda Drug Adverse Event Tools)

• FAERS_count_outcomes_by_drug_event (from Fda Drug Adverse Event Tools)

• FAERS_count_patient_age_distribution (from Fda Drug Adverse Event Tools)

• FAERS_count_reactions_by_drug_event (from Fda Drug Adverse Event Tools)

• FAERS_count_reportercountry_by_drug_event (from Fda Drug Adverse Event Tools)

• FAERS_count_seriousness_by_drug_event (from Fda Drug Adverse Event Tools)

FDADrugLabel (155 tools)

Local Tools:

• FDA_get_abuse_dependence_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_abuse_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_accessories_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_active_ingredient_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_adverse_reactions_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_alarms_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_animal_pharmacology_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_assembly_installation_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_boxed_warning_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_brand_name_generic_name (from Fda Drug Labeling Tools)

• FDA_get_calibration_instructions_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_carcinogenic_mutagenic_fertility_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_child_safety_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_clinical_pharmacology_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_clinical_studies_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_contact_for_questions_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_contraindications_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_controlled_substance_DEA_schedule_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_dear_health_care_provider_letter_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_dependence_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_disposal_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_do_not_use_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_document_id_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_dosage_and_storage_information_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_dosage_forms_and_strengths_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_drug_interactions_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_SPL_ID (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_adverse_reaction (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_calibration_instructions (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_dependence_info (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_document_id (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_dosage_info (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_environmental_warning (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_inactive_ingredient (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_info_on_conditions_for_doctor_consultation (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_labor_and_delivery_info (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_microbiology (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_other_safety_info (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_pharmacodynamics (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_pharmacogenomics (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_precautions (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_pregnancy_or_breastfeeding_info (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_principal_display_panel (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_reference (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_set_id (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_stop_use_info (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_storage_and_handling_info (from Fda Drug Labeling Tools)

• FDA_get_drug_name_by_warnings (from Fda Drug Labeling Tools)

• FDA_get_drug_name_from_patient_package_insert (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_abuse_dependence_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_abuse_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_accessories (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_active_ingredient (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_alarm (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_animal_pharmacology_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_application_number_NDC_number (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_assembly_installation_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_boxed_warning (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_child_safety_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_clinical_pharmacology (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_clinical_studies (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_consulting_doctor_pharmacist_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_contraindications (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_controlled_substance_DEA_schedule (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_dear_health_care_provider_letter_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_disposal_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_dosage_forms_and_strengths_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_drug_interactions (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_effective_time (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_food_safety_warnings (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_general_precautions (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_geriatric_use (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_health_claim (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_indication (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_info_for_nursing_mothers (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_information_for_owners_or_caregivers (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_ingredient (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_instructions_for_use (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_lab_test_interference (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_lab_tests (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_mechanism_of_action (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_medication_guide (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_nonclinical_toxicology_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_nonteratogenic_effects (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_overdosage_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_pediatric_use (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_pharmacokinetics (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_population_use (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_pregnancy_effects_info (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_residue_warning (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_risk (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_route (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_safe_handling_warning (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_safety_summary (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_spl_indexing_data_elements (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_teratogenic_effects (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_user_safety_warning (from Fda Drug Labeling Tools)

• FDA_get_drug_names_by_warnings_and_cautions (from Fda Drug Labeling Tools)

• FDA_get_drugs_by_carcinogenic_mutagenic_fertility (from Fda Drug Labeling Tools)

• FDA_get_effective_time_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_environmental_warning_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_general_precautions_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_geriatric_use_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_health_claims_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_inactive_ingredient_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_indications_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_info_for_nursing_mothers_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_info_for_patients_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_info_on_conditions_for_doctor_consultation_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_info_on_consulting_doctor_pharmacist_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_information_for_owners_or_caregivers_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_ingredients_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_instructions_for_use_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_lab_test_interference_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_lab_tests_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_labor_and_delivery_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_manufacturer_name_NDC_number_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_mechanism_of_action_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_medication_guide_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_microbiology_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_nonclinical_toxicology_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_nonteratogenic_effects_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_other_safety_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_overdosage_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_patient_package_insert_from_drug_name (from Fda Drug Labeling Tools)

• FDA_get_pediatric_use_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_pharmacodynamics_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_pharmacogenomics_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_pharmacokinetics_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_population_use_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_precautions_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_pregnancy_effects_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_pregnancy_or_breastfeeding_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_principal_display_panel_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_purpose_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_recent_changes_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_reference_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_residue_warning_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_risk_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_route_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_safe_handling_warnings_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_safety_summary_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_spl_indexing_data_elements_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_spl_unclassified_section_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_stop_use_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_storage_and_handling_info_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_teratogenic_effects_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_user_safety_warning_by_drug_names (from Fda Drug Labeling Tools)

• FDA_get_warnings_and_cautions_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_warnings_by_drug_name (from Fda Drug Labeling Tools)

• FDA_get_when_using_info (from Fda Drug Labeling Tools)

• FDA_retrieve_device_use_by_drug_name (from Fda Drug Labeling Tools)

• FDA_retrieve_drug_name_by_device_use (from Fda Drug Labeling Tools)

• FDA_retrieve_drug_names_by_patient_medication_info (from Fda Drug Labeling Tools)

• FDA_retrieve_patient_medication_info_by_drug_name (from Fda Drug Labeling Tools)

FDADrugLabelGetDrugGenericNameTool (1 tools)

Local Tools:

• FDA_get_drug_generic_name (from Fda Drug Labeling Tools)

GWASAssociationByID (1 tools)

Local Tools:

• gwas_get_association_by_id (from Gwas Tools)

GWASAssociationSearch (1 tools)

Local Tools:

• gwas_search_associations (from Gwas Tools)

GWASAssociationsForSNP (1 tools)

Local Tools:

• gwas_get_associations_for_snp (from Gwas Tools)

GWASAssociationsForStudy (1 tools)

Local Tools:

• gwas_get_associations_for_study (from Gwas Tools)

GWASAssociationsForTrait (1 tools)

Local Tools:

• gwas_get_associations_for_trait (from Gwas Tools)

GWASSNPByID (1 tools)

Local Tools:

• gwas_get_snp_by_id (from Gwas Tools)

GWASSNPSearch (1 tools)

Local Tools:

• gwas_search_snps (from Gwas Tools)

GWASSNPsForGene (1 tools)

Local Tools:

• gwas_get_snps_for_gene (from Gwas Tools)

GWASStudiesForTrait (1 tools)

Local Tools:

• gwas_get_studies_for_trait (from Gwas Tools)

GWASStudyByID (1 tools)

Local Tools:

• gwas_get_study_by_id (from Gwas Tools)

GWASStudySearch (1 tools)

Local Tools:

• gwas_search_studies (from Gwas Tools)

GWASVariantsForTrait (1 tools)

Local Tools:

• gwas_get_variants_for_trait (from Gwas Tools)

GeneOntologyTool (5 tools)

Local Tools:

• GO_get_annotations_for_gene (from Gene Ontology Tools)

• GO_get_genes_for_term (from Gene Ontology Tools)

• GO_get_term_by_id (from Gene Ontology Tools)

• GO_get_term_details (from Gene Ontology Tools)

• GO_search_terms (from Gene Ontology Tools)

GetSPLBySetIDTool (1 tools)

Local Tools:

• DailyMed_get_spl_by_setid (from Dailymed Tools)

HPAGetBiologicalProcessTool (1 tools)

Local Tools:

• HPA_get_biological_processes_by_gene (from Hpa Tools)

HPAGetCancerPrognosticsTool (1 tools)

Local Tools:

• HPA_get_cancer_prognostics_by_gene (from Hpa Tools)

HPAGetComparativeExpressionTool (1 tools)

Local Tools:

• HPA_get_comparative_expression_by_gene_and_cellline (from Hpa Tools)

HPAGetContextualBiologicalProcessTool (1 tools)

Local Tools:

• HPA_get_contextual_biological_process_analysis (from Hpa Tools)

HPAGetDiseaseExpressionTool (1 tools)

Local Tools:

• HPA_get_disease_expression_by_gene_tissue_disease (from Hpa Tools)

HPAGetGeneJSONTool (1 tools)

Local Tools:

• HPA_get_gene_basic_info_by_ensembl_id (from Hpa Tools)

HPAGetGenePageDetailsTool (1 tools)

Local Tools:

• HPA_get_comprehensive_gene_details_by_ensembl_id (from Hpa Tools)

HPAGetGeneXMLTool (1 tools)

Local Tools:

• HPA_get_gene_tsv_data_by_ensembl_id (from Hpa Tools)

HPAGetProteinInteractionsTool (1 tools)

Local Tools:

• HPA_get_protein_interactions_by_gene (from Hpa Tools)

HPAGetRnaExpressionBySourceTool (1 tools)

Local Tools:

• HPA_get_rna_expression_by_source (from Hpa Tools)

HPAGetRnaExpressionByTissueTool (1 tools)

Local Tools:

• HPA_get_rna_expression_in_specific_tissues (from Hpa Tools)

HPAGetSubcellularLocationTool (1 tools)

Local Tools:

• HPA_get_subcellular_location (from Hpa Tools)

HPASearchGenesTool (1 tools)

Local Tools:

• HPA_search_genes_by_query (from Hpa Tools)

HumanBaseTool (1 tools)

Local Tools:

• humanbase_ppi_analysis (from Humanbase Tools)

MCPAutoLoaderTool (5 tools)

Local Tools:

• mcp_auto_loader_boltz (from Boltz Tools)

• mcp_auto_loader_expert_feedback (from Expert Feedback Tools)

• mcp_auto_loader_server1 (from Mcp Client Tools Example)

• mcp_auto_loader_txagent (from Txagent Client Tools)

• mcp_auto_loader_uspto_downloader (from Uspto Downloader Tools)

MCPClientTool (1 tools)

Local Tools:

• mcp_client_example (from Mcp Client Tools Example)

MCPProxyTool (2 tools)

Local Tools:

• mcp_mock_calculator (from Mcp Client Tools Example)

• mcp_mock_greeter (from Mcp Client Tools Example)

MedlinePlusRESTTool (5 tools)

Local Tools:

• MedlinePlus_connect_lookup_by_code (from Medlineplus Tools)

• MedlinePlus_get_genetics_condition_by_name (from Medlineplus Tools)

• MedlinePlus_get_genetics_gene_by_name (from Medlineplus Tools)

• MedlinePlus_get_genetics_index (from Medlineplus Tools)

• MedlinePlus_search_topics_by_keyword (from Medlineplus Tools)

Monarch (2 tools)

Local Tools:

• get_HPO_ID_by_phenotype (from Monarch Tools)

• get_phenotype_by_HPO_ID (from Monarch Tools)

MonarchDiseasesForMultiplePheno (1 tools)

Local Tools:

• get_joint_associated_diseases_by_HPO_ID_list (from Monarch Tools)

ODPHPItemList (1 tools)

Local Tools:

• odphp_itemlist (from Odphp Tools)

ODPHPMyHealthfinder (1 tools)

Local Tools:

• odphp_myhealthfinder (from Odphp Tools)

ODPHPOutlinkFetch (1 tools)

Local Tools:

• odphp_outlink_fetch (from Odphp Tools)

ODPHPTopicSearch (1 tools)

Local Tools:

• odphp_topicsearch (from Odphp Tools)

OpenAlexTool (1 tools)

Local Tools:

• openalex_literature_search (from Openalex Tools)

OpenTarget (54 tools)

Local Tools:

• OpenTargets_drug_pharmacogenomics_data (from Opentarget Tools)

• OpenTargets_get_approved_indications_by_drug_chemblId (from Opentarget Tools)

• OpenTargets_get_associated_diseases_by_drug_chemblId (from Opentarget Tools)

• OpenTargets_get_associated_drugs_by_disease_efoId (from Opentarget Tools)

• OpenTargets_get_associated_drugs_by_target_ensemblID (from Opentarget Tools)

• OpenTargets_get_associated_phenotypes_by_disease_efoId (from Opentarget Tools)

• OpenTargets_get_associated_targets_by_disease_efoId (from Opentarget Tools)

• OpenTargets_get_associated_targets_by_drug_chemblId (from Opentarget Tools)

• OpenTargets_get_biological_mouse_models_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_chemical_probes_by_target_ensemblID (from Opentarget Tools)

• OpenTargets_get_disease_ancestors_parents_by_efoId (from Opentarget Tools)

• OpenTargets_get_disease_descendants_children_by_efoId (from Opentarget Tools)

• OpenTargets_get_disease_description_by_efoId (from Opentarget Tools)

• OpenTargets_get_disease_id_description_by_name (from Opentarget Tools)

• OpenTargets_get_disease_ids_by_efoId (from Idmap Tools)

• OpenTargets_get_disease_ids_by_name (from Idmap Tools)

• OpenTargets_get_disease_locations_by_efoId (from Opentarget Tools)

• OpenTargets_get_disease_synonyms_by_efoId (from Opentarget Tools)

• OpenTargets_get_disease_therapeutic_areas_by_efoId (from Opentarget Tools)

• OpenTargets_get_diseases_phenotypes_by_target_ensembl (from Opentarget Tools)

• OpenTargets_get_drug_adverse_events_by_chemblId (from Opentarget Tools)

• OpenTargets_get_drug_approval_status_by_chemblId (from Opentarget Tools)

• OpenTargets_get_drug_description_by_chemblId (from Opentarget Tools)

• OpenTargets_get_drug_indications_by_chemblId (from Opentarget Tools)

• OpenTargets_get_drug_mechanisms_of_action_by_chemblId (from Opentarget Tools)

• OpenTargets_get_drug_synonyms_by_chemblId (from Opentarget Tools)

• OpenTargets_get_drug_trade_names_by_chemblId (from Opentarget Tools)

• OpenTargets_get_drug_warnings_by_chemblId (from Opentarget Tools)

• OpenTargets_get_drug_withdrawn_blackbox_status_by_chemblId (from Opentarget Tools)

• OpenTargets_get_gene_ontology_terms_by_goID (from Opentarget Tools)

• OpenTargets_get_known_drugs_by_drug_chemblId (from Opentarget Tools)

• OpenTargets_get_parent_child_molecules_by_drug_chembl_ID (from Opentarget Tools)

• OpenTargets_get_publications_by_disease_efoId (from Opentarget Tools)

• OpenTargets_get_publications_by_drug_chemblId (from Opentarget Tools)

• OpenTargets_get_publications_by_target_ensemblID (from Opentarget Tools)

• OpenTargets_get_similar_entities_by_disease_efoId (from Opentarget Tools)

• OpenTargets_get_similar_entities_by_drug_chemblId (from Opentarget Tools)

• OpenTargets_get_similar_entities_by_target_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_classes_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_constraint_info_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_enabling_packages_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_gene_ontology_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_genomic_location_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_homologues_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_id_description_by_name (from Opentarget Tools)

• OpenTargets_get_target_interactions_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_safety_profile_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_subcellular_locations_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_synonyms_by_ensemblID (from Opentarget Tools)

• OpenTargets_get_target_tractability_by_ensemblID (from Opentarget Tools)

• OpenTargets_map_any_disease_id_to_all_other_ids (from Idmap Tools)

• OpenTargets_multi_entity_search_by_query_string (from Opentarget Tools)

• OpenTargets_search_category_counts_by_query_string (from Opentarget Tools)

• OpenTargets_target_disease_evidence (from Opentarget Tools)

OpentargetToolDrugNameMatch (2 tools)

Local Tools:

• OpenTargets_get_drug_chembId_by_generic_name (from Opentarget Tools)

• OpenTargets_get_drug_id_description_by_name (from Opentarget Tools)

PackageTool (164 tools)

Local Tools:

• get_albumentations_info (from Image Processing Tools)

• get_altair_info (from Visualization Tools)

• get_anndata_info (from Single Cell Tools)

• get_arboreto_info (from Genomics Tools)

• get_arxiv_info (from Bioinformatics Core Tools)

• get_ase_info (from Structural Biology Tools)

• get_astropy_info (from Physics Astronomy Tools)

• get_biopandas_info (from Structural Biology Tools)

• get_biopython_info (from Bioinformatics Core Tools)

• get_bioservices_info (from Bioinformatics Core Tools)

• get_biotite_info (from Bioinformatics Core Tools)

• get_bokeh_info (from Visualization Tools)

• get_brian2_info (from Neuroscience Tools)

• get_cartopy_info (from Earth Sciences Tools)

• get_catboost_info (from Machine Learning Tools)

• get_cellpose_info (from Visualization Tools)

• get_cellrank_info (from Single Cell Tools)

• get_cellxgene_census_info (from Genomics Tools)

• get_cftime_info (from Earth Sciences Tools)

• get_chembl_webresource_client_info (from Cheminformatics Tools)

• get_clair3_info (from Genomics Tools)

• get_cobra_info (from Cheminformatics Tools)

• get_cobrapy_info (from Machine Learning Tools)

• get_cooler_info (from Scientific Computing Tools)

• get_cryosparc_tools_info (from Bioinformatics Core Tools)

• get_cupy_info (from Scientific Computing Tools)

• get_cyvcf2_info (from Genomics Tools)

• get_dask_info (from Scientific Computing Tools)

• get_datamol_info (from Cheminformatics Tools)

• get_datashader_info (from Visualization Tools)

• get_deepchem_info (from Cheminformatics Tools)

• get_deeppurpose_info (from Machine Learning Tools)

• get_deeptools_info (from Genomics Tools)

• get_deepxde_info (from Machine Learning Tools)

• get_dendropy_info (from Bioinformatics Core Tools)

• get_descriptastorus_info (from Structural Biology Tools)

• get_diffdock_info (from Structural Biology Tools)

• get_dscribe_info (from Cheminformatics Tools)

• get_elephant_info (from Neuroscience Tools)

• get_episcanpy_info (from Single Cell Tools)

• get_ete3_info (from Bioinformatics Core Tools)

• get_faiss_info (from Machine Learning Tools)

• get_fanc_info (from Bioinformatics Core Tools)

• get_flask_info (from Bioinformatics Core Tools)

• get_flowio_info (from Bioinformatics Core Tools)

• get_flowkit_info (from Bioinformatics Core Tools)

• get_flowutils_info (from Scientific Computing Tools)

• get_freesasa_info (from Structural Biology Tools)

• get_galpy_info (from Physics Astronomy Tools)

• get_geopandas_info (from Earth Sciences Tools)

• get_gget_info (from Bioinformatics Core Tools)

• get_googlesearch_python_info (from Bioinformatics Core Tools)

• get_gseapy_info (from Genomics Tools)

• get_h5py_info (from Scientific Computing Tools)

• get_harmony_pytorch_info (from Machine Learning Tools)

• get_hmmlearn_info (from Machine Learning Tools)

• get_holoviews_info (from Visualization Tools)

• get_htmd_info (from Structural Biology Tools)

• get_hyperopt_info (from Machine Learning Tools)

• get_igraph_info (from Visualization Tools)

• get_imageio_info (from Image Processing Tools)

• get_imbalanced_learn_info (from Machine Learning Tools)

• get_jcvi_info (from Genomics Tools)

• get_joblib_info (from Scientific Computing Tools)

• get_khmer_info (from Bioinformatics Core Tools)

• get_kipoiseq_info (from Genomics Tools)

• get_lifelines_info (from Bioinformatics Core Tools)

• get_lightgbm_info (from Machine Learning Tools)

• get_loompy_info (from Bioinformatics Core Tools)

• get_mageck_info (from Bioinformatics Core Tools)

• get_matplotlib_info (from Visualization Tools)

• get_mdanalysis_info (from Structural Biology Tools)

• get_mdtraj_info (from Structural Biology Tools)

• get_mne_info (from Neuroscience Tools)

• get_molfeat_info (from Cheminformatics Tools)

• get_molvs_info (from Cheminformatics Tools)

• get_mordred_info (from Cheminformatics Tools)

• get_msprime_info (from Bioinformatics Core Tools)

• get_mudata_info (from Single Cell Tools)

• get_neo_info (from Neuroscience Tools)

• get_netcdf4_info (from Earth Sciences Tools)

• get_networkx_info (from Bioinformatics Core Tools)

• get_nglview_info (from Structural Biology Tools)

• get_nilearn_info (from Neuroscience Tools)

• get_numba_info (from Bioinformatics Core Tools)

• get_numpy_info (from Scientific Computing Tools)

• get_openbabel_info (from Cheminformatics Tools)

• get_openchem_info (from Cheminformatics Tools)

• get_opencv_info (from Visualization Tools)

• get_openmm_info (from Structural Biology Tools)

• get_optlang_info (from Scientific Computing Tools)

• get_optuna_info (from Machine Learning Tools)

• get_palantir_info (from Single Cell Tools)

• get_pandas_info (from Scientific Computing Tools)

• get_patsy_info (from Scientific Computing Tools)

• get_pdbfixer_info (from Bioinformatics Core Tools)

• get_pillow_info (from Image Processing Tools)

• get_plantcv_info (from Visualization Tools)

• get_plip_info (from Bioinformatics Core Tools)

• get_plotly_info (from Visualization Tools)

• get_poliastro_info (from Bioinformatics Core Tools)

• get_poretools_info (from Genomics Tools)

• get_prody_info (from Bioinformatics Core Tools)

• get_pubchempy_info (from Cheminformatics Tools)

• get_pybedtools_info (from Genomics Tools)

• get_pybigwig_info (from Bioinformatics Core Tools)

• get_pydeseq2_info (from Genomics Tools)

• get_pyensembl_info (from Genomics Tools)

• get_pyephem_info (from Physics Astronomy Tools)

• get_pyfaidx_info (from Genomics Tools)

• get_pyfasta_info (from Genomics Tools)

• get_pykalman_info (from Bioinformatics Core Tools)

• get_pyliftover_info (from Genomics Tools)

• get_pymassspec_info (from Bioinformatics Core Tools)

• get_pymed_info (from Bioinformatics Core Tools)

• get_pymzml_info (from Machine Learning Tools)

• get_pypdf2_info (from Bioinformatics Core Tools)

• get_pyranges_info (from Genomics Tools)

• get_pyrosetta_info (from Structural Biology Tools)

• get_pysam_info (from Genomics Tools)

• get_pyscenic_info (from Single Cell Tools)

• get_pyscf_info (from Structural Biology Tools)

• get_pyscreener_info (from Bioinformatics Core Tools)

• get_pytdc_info (from Bioinformatics Core Tools)

• get_python_libsbml_info (from Machine Learning Tools)

• get_pytorch_info (from Machine Learning Tools)

• get_pyvcf_info (from Genomics Tools)

• get_pyvis_info (from Visualization Tools)

• get_qutip_info (from Physics Astronomy Tools)

• get_rasterio_info (from Earth Sciences Tools)

• get_rdkit_info (from Cheminformatics Tools)

• get_reportlab_info (from Genomics Tools)

• get_requests_info (from Bioinformatics Core Tools)

• get_ruptures_info (from Bioinformatics Core Tools)

• get_scanorama_info (from Single Cell Tools)

• get_scanpy_info (from Single Cell Tools)

• get_schnetpack_info (from Machine Learning Tools)

• get_scholarly_info (from Bioinformatics Core Tools)

• get_scikit_bio_info (from Bioinformatics Core Tools)

• get_scikit_image_info (from Visualization Tools)

• get_scikit_learn_info (from Machine Learning Tools)

• get_scipy_info (from Scientific Computing Tools)

• get_scrublet_info (from Single Cell Tools)

• get_scvelo_info (from Single Cell Tools)

• get_scvi_tools_info (from Single Cell Tools)

• get_seaborn_info (from Visualization Tools)

• get_skopt_info (from Machine Learning Tools)

• get_souporcell_info (from Single Cell Tools)

• get_statsmodels_info (from Machine Learning Tools)

• get_sunpy_info (from Physics Astronomy Tools)

• get_sympy_info (from Scientific Computing Tools)

• get_tiledb_info (from Scientific Computing Tools)

• get_tiledbsoma_info (from Single Cell Tools)

• get_torch_geometric_info (from Machine Learning Tools)

• get_tqdm_info (from Scientific Computing Tools)

• get_trackpy_info (from Bioinformatics Core Tools)

• get_tskit_info (from Bioinformatics Core Tools)

• get_umap_learn_info (from Machine Learning Tools)

• get_velocyto_info (from Single Cell Tools)

• get_viennarna_info (from Genomics Tools)

• get_xarray_info (from Scientific Computing Tools)

• get_xesmf_info (from Earth Sciences Tools)

• get_xgboost_info (from Machine Learning Tools)

• get_zarr_info (from Scientific Computing Tools)

PubChemRESTTool (9 tools)

Local Tools:

• PubChem_get_CID_by_SMILES (from Pubchem Tools)

• PubChem_get_CID_by_compound_name (from Pubchem Tools)

• PubChem_get_associated_patents_by_CID (from Pubchem Tools)

• PubChem_get_compound_2D_image_by_CID (from Pubchem Tools)

• PubChem_get_compound_properties_by_CID (from Pubchem Tools)

• PubChem_get_compound_synonyms_by_CID (from Pubchem Tools)

• PubChem_get_compound_xrefs_by_CID (from Pubchem Tools)

• PubChem_search_compounds_by_similarity (from Pubchem Tools)

• PubChem_search_compounds_by_substructure (from Pubchem Tools)

PubTatorTool (2 tools)

Local Tools:

• PubTator3_EntityAutocomplete (from Pubtator Tools)

• PubTator3_LiteratureSearch (from Pubtator Tools)

RCSBTool (39 tools)

Local Tools:

• get_assembly_info_by_pdb_id (from Rcsb Pdb Tools)

• get_assembly_summary (from Rcsb Pdb Tools)

• get_binding_affinity_by_pdb_id (from Rcsb Pdb Tools)

• get_chem_comp_audit_info (from Rcsb Pdb Tools)

• get_chem_comp_charge_and_ambiguity (from Rcsb Pdb Tools)

• get_citation_info_by_pdb_id (from Rcsb Pdb Tools)

• get_core_refinement_statistics (from Rcsb Pdb Tools)

• get_crystal_growth_conditions_by_pdb_id (from Rcsb Pdb Tools)

• get_crystallization_ph_by_pdb_id (from Rcsb Pdb Tools)

• get_crystallographic_properties_by_pdb_id (from Rcsb Pdb Tools)

• get_ec_number_by_entity_id (from Rcsb Pdb Tools)

• get_em_3d_fitting_and_reconstruction_details (from Rcsb Pdb Tools)

• get_emdb_ids_by_pdb_id (from Rcsb Pdb Tools)

• get_gene_name_by_entity_id (from Rcsb Pdb Tools)

• get_host_organism_by_pdb_id (from Rcsb Pdb Tools)

• get_ligand_bond_count_by_pdb_id (from Rcsb Pdb Tools)

• get_ligand_smiles_by_chem_comp_id (from Rcsb Pdb Tools)

• get_mutation_annotations_by_pdb_id (from Rcsb Pdb Tools)

• get_oligosaccharide_descriptors_by_entity_id (from Rcsb Pdb Tools)

• get_polymer_entity_annotations (from Rcsb Pdb Tools)

• get_polymer_entity_count_by_pdb_id (from Rcsb Pdb Tools)

• get_polymer_entity_ids_by_pdb_id (from Rcsb Pdb Tools)

• get_polymer_entity_type_by_entity_id (from Rcsb Pdb Tools)

• get_polymer_molecular_weight_by_entity_id (from Rcsb Pdb Tools)

• get_protein_classification_by_pdb_id (from Rcsb Pdb Tools)

• get_protein_metadata_by_pdb_id (from Rcsb Pdb Tools)

• get_refinement_resolution_by_pdb_id (from Rcsb Pdb Tools)

• get_release_deposit_dates_by_pdb_id (from Rcsb Pdb Tools)

• get_sequence_by_pdb_id (from Rcsb Pdb Tools)

• get_sequence_lengths_by_pdb_id (from Rcsb Pdb Tools)

• get_sequence_positional_features_by_instance_id (from Rcsb Pdb Tools)

• get_source_organism_by_pdb_id (from Rcsb Pdb Tools)

• get_space_group_by_pdb_id (from Rcsb Pdb Tools)

• get_structure_determination_software_by_pdb_id (from Rcsb Pdb Tools)

• get_structure_title_by_pdb_id (from Rcsb Pdb Tools)

• get_structure_validation_metrics_by_pdb_id (from Rcsb Pdb Tools)

• get_target_cofactor_info (from Rcsb Pdb Tools)

• get_taxonomy_by_pdb_id (from Rcsb Pdb Tools)

• get_uniprot_accession_by_entity_id (from Rcsb Pdb Tools)

ReactomeRESTTool (1 tools)

Local Tools:

• Reactome_get_pathway_reactions (from Reactome Tools)

RemoteTool (14 tools)

Remote Tools:

• boltz2_docking (from Boltz Tools)

• compute_depmap24q2_gene_correlations (from Depmap Tools)

• consult_human_expert (from Expert Feedback Tools)

• get_abstract_from_patent_app_number (from Uspto Downloader Tools)

• get_claims_from_patent_app_number (from Uspto Downloader Tools)

• get_expert_response (from Expert Feedback Tools)

• get_expert_status (from Expert Feedback Tools)

• get_full_text_from_patent_app_number (from Uspto Downloader Tools)

• list_pending_expert_requests (from Expert Feedback Tools)

• mcp_auto_loader_human_expert (from Expert Feedback Tools)

• run_compass_prediction (from Immune Compass Tools)

• run_pinnacle_ppi_retrieval (from Pinnacle Tools)

• run_transcriptformer_embedding_retrieval (from Transcriptformer Tools)

• submit_expert_response (from Expert Feedback Tools)

SearchSPLTool (1 tools)

Local Tools:

• DailyMed_search_spls (from Dailymed Tools)

SemanticScholarTool (1 tools)

Local Tools:

• SemanticScholar_search_papers (from Semantic Scholar Tools)

SpecialTool (2 tools)

Local Tools:

• CallAgent (from Special Tools)

• Finish (from Special Tools)

ToolFinderEmbedding (2 tools)

Local Tools:

• Tool_Finder (from Finder Tools)

• Tool_RAG (from Finder Tools)

ToolFinderKeyword (1 tools)

Local Tools:

• Tool_Finder_Keyword (from Finder Tools)

ToolFinderLLM (1 tools)

Local Tools:

• Tool_Finder_LLM (from Finder Tools)

URLHTMLTagTool (1 tools)

Local Tools:

• get_webpage_title (from Url Fetch Tools)

URLToPDFTextTool (1 tools)

Local Tools:

• get_webpage_text_from_url (from Url Fetch Tools)

USPTOOpenDataPortalTool (6 tools)

Local Tools:

• get_associated_documents_metadata (from Uspto Tools)

• get_patent_application_metadata (from Uspto Tools)

• get_patent_continuity_data (from Uspto Tools)

• get_patent_foreign_priority_data (from Uspto Tools)

• get_patent_overview_by_text_query (from Uspto Tools)

• get_patent_term_adjustment_data (from Uspto Tools)

UniProtRESTTool (10 tools)

Local Tools:

• UniProt_get_alternative_names_by_accession (from Uniprot Tools)

• UniProt_get_disease_variants_by_accession (from Uniprot Tools)

• UniProt_get_entry_by_accession (from Uniprot Tools)

• UniProt_get_function_by_accession (from Uniprot Tools)

• UniProt_get_isoform_ids_by_accession (from Uniprot Tools)

• UniProt_get_organism_by_accession (from Uniprot Tools)

• UniProt_get_ptm_processing_by_accession (from Uniprot Tools)

• UniProt_get_recommended_name_by_accession (from Uniprot Tools)

• UniProt_get_sequence_by_accession (from Uniprot Tools)

• UniProt_get_subcellular_location_by_accession (from Uniprot Tools)

XMLTool (19 tools)

Local Tools:

• drugbank_filter_drugs_by_name (from Xml Tools)

• drugbank_get_drug_basic_info_by_drug_name_or_drugbank_id (from Xml Tools)

• drugbank_get_drug_chemistry_by_drug_name_or_drugbank_id (from Xml Tools)

• drugbank_get_drug_interactions_by_drug_name_or_drugbank_id (from Xml Tools)

• drugbank_get_drug_name_and_description_by_indication (from Xml Tools)

• drugbank_get_drug_name_and_description_by_pathway_name (from Xml Tools)

• drugbank_get_drug_name_and_description_by_target_name (from Xml Tools)

• drugbank_get_drug_name_description_pharmacology_by_mechanism_of_action (from Xml Tools)

• drugbank_get_drug_pathways_and_reactions_by_drug_name_or_drugbank_id (from Xml Tools)

• drugbank_get_drug_products_by_name_or_drugbank_id (from Xml Tools)

• drugbank_get_drug_references_by_drug_name_or_drugbank_id (from Xml Tools)

• drugbank_get_indications_by_drug_name_or_drugbank_id (from Xml Tools)

• drugbank_get_pharmacology_by_drug_name_or_drugbank_id (from Xml Tools)

• drugbank_get_safety_by_drug_name_or_drugbank_id (from Xml Tools)

• drugbank_get_targets_by_drug_name_or_drugbank_id (from Xml Tools)

• mesh_get_subjects_by_pharmacological_action (from Xml Tools)

• mesh_get_subjects_by_subject_id (from Xml Tools)

• mesh_get_subjects_by_subject_name (from Xml Tools)

• mesh_get_subjects_by_subject_scope_or_definition (from Xml Tools)

Quick Tool Search

Use your browser’s search function (Ctrl+F / Cmd+F) to quickly find:

• Tool Name: Search for the exact tool name

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