Data Sources

ToolUniverse integrates with the following scientific sources, AI models, and services. We thank all the organizations and teams behind these valuable resources for making their data and tools publicly available.

• ADMET.ai - ADMET.ai

• AlphaFold - AlphaFold

• Azure OpenAI - Azure OpenAI

• Boltz - Boltz

• ChEBI - ChEBI

• ChEMBL - ChEMBL

• ChatGPT API - ChatGPT API

• Claude Code - Claude Code

• ClinicalTrials.gov - ClinicalTrials.gov

• COMPASS - COMPASS

• DailyMed - DailyMed

• DeepSeek - DeepSeek

• DepMap - DepMap

• DrugBank - DrugBank

• EFO (Experimental Factor Ontology) - EFO

• EMBL-EBI OLS (Ontology Lookup Service) - EMBL-EBI OLS

• Enrichr - Enrichr

• Ensembl - Ensembl

• Europe PMC - Europe PMC

• FDA (FAERS) - FDA FAERS

• FDA OpenFDA API - FDA OpenFDA API

• Gene Ontology - Gene Ontology

• Gemini - Gemini

• GitHub - GitHub

• GPT Codex CLI - GPT Codex CLI

• GWAS Catalog - GWAS Catalog

• Hugging Face - Hugging Face

• Human Protein Atlas - Human Protein Atlas

• HumanBase - HumanBase

• Immune Compass - Immune Compass

• KEGG - KEGG

• Kempner Institute - Kempner Institute

• MeSH - MeSH

• MedlinePlus - MedlinePlus

• Monarch Initiative - Monarch Initiative

• MyGene.info - MyGene.info

• NCBI Entrez - NCBI Entrez

• OpenAlex - OpenAlex

• OpenTargets - OpenTargets

• OpenTargets Genetics API - OpenTargets Genetics API

• OpenTargets Platform API - OpenTargets Platform API

• PINNACLE - PINNACLE

• PubChem - PubChem

• PubTator - PubTator

• PyPI - PyPI

• Qwen Code - Qwen Code

• RCSB PDB - RCSB PDB

• Reactome - Reactome

• Semantic Scholar - Semantic Scholar

• Chan Zuckerberg Initiative - Chan Zuckerberg Initiative

• Transcriptformer - Transcriptformer

• UniProt - UniProt

• USPTO - USPTO