Remap Tools

Configuration File: remap_tools.json Tool Type: Local Tools Count: 1

This page contains all tools defined in the remap_tools.json configuration file.

Available Tools

ReMap_get_transcription_factor_binding (Type: ReMapRESTTool)

Get transcription factor binding sites from ReMap database for specific genes and cell types

ReMap_get_transcription_factor_binding tool specification

Tool Information:

  • Name: ReMap_get_transcription_factor_binding

  • Type: ReMapRESTTool

  • Description: Get transcription factor binding sites from ReMap database for specific genes and cell types

Parameters:

  • gene_name (string) (required) Gene symbol (e.g., BRCA1, TP53, MYC)

  • cell_type (string) (optional) Cell type (e.g., HepG2, K562, MCF-7)

  • limit (integer) (optional) Number of results to return

Example Usage:

query = {
    "name": "ReMap_get_transcription_factor_binding",
    "arguments": {
        "gene_name": "example_value"
    }
}
result = tu.run(query)