Reactome Tools

Configuration File: reactome_tools.json Tool Type: Local Tools Count: 1

This page contains all tools defined in the reactome_tools.json configuration file.

Available Tools

Reactome_get_pathway_reactions (Type: ReactomeRESTTool)

Query all Reactions contained under a Pathway using Pathway Stable ID. This is currently the only…

Reactome_get_pathway_reactions tool specification

Tool Information:

  • Name: Reactome_get_pathway_reactions

  • Type: ReactomeRESTTool

  • Description: Query all Reactions contained under a Pathway using Pathway Stable ID. This is currently the only working Reactome tool.

Parameters:

  • stId (string) (required) Pathway Stable ID, e.g., ‘R-HSA-73817’ (verified valid).

Example Usage:

query = {
    "name": "Reactome_get_pathway_reactions",
    "arguments": {
        "stId": "example_value"
    }
}
result = tu.run(query)