Mpd Tools#

Configuration File: mpd_tools.json Tool Type: Local Tools Count: 1

This page contains all tools defined in the mpd_tools.json configuration file.

Available Tools#

MPD_get_phenotype_data (Type: MPDRESTTool)#

Search ENCODE experiment records mentioning a given mouse strain (used as a Mouse Phenome Databas…

MPD_get_phenotype_data tool specification

Tool Information:

  • Name: MPD_get_phenotype_data

  • Type: MPDRESTTool

  • Description: Search ENCODE experiment records mentioning a given mouse strain (used as a Mouse Phenome Database alternative – MPD’s own REST API has no simple strain+category phenotype search; see https://phenome.jax.org/api for genuine curated MPD phenotype data). ‘phenotype_category’ is not applied – ENCODE has no equivalent concept.

Parameters:

  • strain (string) (optional) Mouse strain (e.g., C57BL/6J, BALB/c, DBA/2J)

  • phenotype_category (string) (optional) Not currently applied to the query – ENCODE (this tool’s data source) has no phenotype-category concept. Retained for forward compatibility with a future genuine MPD-backed implementation.

  • limit (integer) (optional) Number of results to return

Example Usage:

query = {
    "name": "MPD_get_phenotype_data",
    "arguments": {
    }
}
result = tu.run(query)