Cancerppd2 Tools

Configuration File: cancerppd2_tools.json Tool Type: Local Tools Count: 1

This page contains all tools defined in the cancerppd2_tools.json configuration file.

Available Tools

CancerPPD2_search_peptides (Type: CancerPPD2SearchPeptidesTool)

Search CancerPPD 2.0 (Raghava lab, IIITD) for experimentally validated ANTICANCER peptide records…

CancerPPD2_search_peptides tool specification

Tool Information:

  • Name: CancerPPD2_search_peptides

  • Type: CancerPPD2SearchPeptidesTool

  • Description: Search CancerPPD 2.0 (Raghava lab, IIITD) for experimentally validated ANTICANCER peptide records. Filter by ‘cancer_type’ (e.g. Fibrosarcoma), ‘cell_line’ (e.g. A-549), or ‘seq’ (sequence nature: Natural or Modified). Each record returns the peptide sequence, length, linear/cyclic form, chirality, chemical and N/C-terminus modifications, target cell line, cancer type, assay, test time, tissue, PubMed ID, and year. Use for non-immune anticancer-peptide discovery / target-cell-line surveys. Keyless public API.

Parameters:

  • dataType (string) (optional) Field to filter on. One of: ‘cancer_type’ (e.g. Fibrosarcoma), ‘cell_line’ (e.g. A-549), or ‘seq’ (sequence nature: Natural or Modified). Default: ‘cancer_type’.

  • dataValue (string) (required) Value to match for the chosen dataType. Examples: ‘Fibrosarcoma’ (with dataType=cancer_type) -> ~101 records; ‘A-549’ (with dataType=cell_line) -> ~232 records; ‘Natural’ or ‘Modified’ (with dataType=seq).

Example Usage:

query = {
    "name": "CancerPPD2_search_peptides",
    "arguments": {
        "dataValue": "example_value"
    }
}
result = tu.run(query)