Peplife2 Tools

Configuration File: peplife2_tools.json Tool Type: Local Tools Count: 1

This page contains all tools defined in the peplife2_tools.json configuration file.

Available Tools

PEPlife2_search_peptides (Type: PEPlife2SearchPeptidesTool)

Search PEPlife 2.0 (Raghava lab, IIITD) for experimentally measured peptide HALF-LIFE / proteolyt…

PEPlife2_search_peptides tool specification

Tool Information:

  • Name: PEPlife2_search_peptides

  • Type: PEPlife2SearchPeptidesTool

  • Description: Search PEPlife 2.0 (Raghava lab, IIITD) for experimentally measured peptide HALF-LIFE / proteolytic-stability records. Filter by ‘lin_cyc’ (Linear or Cyclic), ‘org’ (origin organism / incubation media), or ‘seq’ (sequence). Each record returns the peptide sequence, half-life value and units, protease, incubation time, concentration, assay, linear/cyclic form, chirality, chemical and N/C-terminus modifications, origin, nature, PubMed ID, and year. Use to assess therapeutic-peptide stability / druggability. Keyless public API.

Parameters:

  • dataType (string) (optional) Field to filter on. One of: ‘lin_cyc’ (Linear or Cyclic), ‘org’ (origin organism / incubation media), or ‘seq’ (sequence). Default: ‘lin_cyc’.

  • dataValue (string) (required) Value to match for the chosen dataType. Examples: ‘Linear’ (with dataType=lin_cyc) -> ~3777 records; ‘Cyclic’ (with dataType=lin_cyc) -> ~49 records.

Example Usage:

query = {
    "name": "PEPlife2_search_peptides",
    "arguments": {
        "dataValue": "example_value"
    }
}
result = tu.run(query)