可用工具¶

ToolUniverse 提供了超过600种科学工具，分为本地和远程两大类。本概览帮助您发现并导航适合您研究需求的可用工具。

工具注册表¶

本地工具¶

本地工具是运行在 ToolUniverse 进程内的 Python 类，提供高性能和无缝集成。

主要特性： - 高性能且无网络开销 - 自动发现与注册 - 完全支持 ToolUniverse 功能 - 便捷的开发与测试

远程工具¶

远程工具集成运行于不同服务器上的外部服务、API 及专用系统。

主要功能： - 与外部API和服务的集成 - 可扩展的计算卸载 - 支持多种编程语言 - 敏感操作的安全隔离

小技巧

发现可用工具：

工具清单教程 - 按类别浏览工具并探索完整目录
Tool Finder Tutorial - Learn advanced search techniques and filters
远程工具设置 - 设置远程工具集成
工具加载教程 - 加载并配置本地工具

概述¶

Total Configuration Files: 535
Total Tools: 2343

本地工具¶

备注

在 ToolUniverse 进程中运行的工具

远程工具¶

备注

工具已在远程注册表中注册

按类型分类的工具¶

ADAStandardsTool (3 tools)¶

本地工具：

ADA_get_standards_section (from Ada Aha Nccn Tools)
ADA_list_standards_sections (from Ada Aha Nccn Tools)
ADA_search_standards (from Ada Aha Nccn Tools)

ADMETAITool（9 个工具）¶

本地工具：

ADMETAI_predict_BBB_penetrance（来自：Admetai 工具）
ADMETAI_predict_CYP_interactions（来自：Admetai 工具）
ADMETAI_predict_bioavailability（来自 Admetai 工具）
ADMETAI_predict_clearance_distribution（来自：Admetai 工具）
ADMETAI_predict_nuclear_receptor_activity（来自 Admetai 工具）
ADMETAI_predict_physicochemical_properties（来自：Admetai 工具）
ADMETAI_predict_solubility_lipophilicity_hydration（来自：Admetai 工具）
ADMETAI_predict_stress_response（来自：Admetai 工具）
ADMETAI_predict_toxicity（来自：Admetai 工具）

AHAACCGuidelineTool (4 tools)¶

本地工具：

ACC_list_guidelines (from Ada Aha Nccn Tools)
AHA_ACC_get_guideline (from Ada Aha Nccn Tools)
AHA_ACC_search_guidelines (from Ada Aha Nccn Tools)
AHA_list_guidelines (from Ada Aha Nccn Tools)

AOPWikiDetailTool (1 tools)¶

本地工具：

AOPWiki_get_aop (from Aopwiki Tools)

AOPWikiListTool (1 tools)¶

本地工具：

AOPWiki_list_aops (from Aopwiki Tools)

APPRISTool (3 tools)¶

本地工具：

APPRIS_get_functional_annotations (from Appris Tools)
APPRIS_get_isoforms (from Appris Tools)
APPRIS_get_principal_isoform (from Appris Tools)

ARCHS4Tool (2 tools)¶

本地工具：

ARCHS4_get_gene_correlations (from Archs4 Tools)
ARCHS4_get_gene_expression (from Archs4 Tools)

AddgeneTool (3 tools)¶

本地工具：

Addgene_get_plasmid (from Addgene Tools)
Addgene_search_depositors (from Addgene Tools)
Addgene_search_plasmids (from Addgene Tools)

AgenticTool (50 tools)¶

本地工具：

ADMETAnalyzerAgent (from 药物发现剂)
AdvancedCodeQualityAnalyzer（来自智能体工具）
AdverseEventICDMapper（来自不良事件工具）
AdverseEventPredictionQuestionGenerator（来自：不良事件工具）
带上下文的AdverseEventPredictionQuestionGenerator（来自：不良事件工具）
ArgumentDescriptionOptimizer (from Optimizer Tools)
ClinicalTrialDesignAgent (from 药物发现剂)
CodeQualityAnalyzer (from Tool Discovery Agents)
CompoundDiscoveryAgent (from 药物发现剂)
DataAnalysisValidityReviewer（来自：智能体工具）
DescriptionAnalyzer (from Optimizer Tools)
DescriptionQualityEvaluator (from Optimizer Tools)
DiseaseAnalyzerAgent (from 药物发现剂)
DomainExpertValidator（来自智能体工具）
DrugInteractionAnalyzerAgent (from 药物发现剂)
DrugOptimizationAgent (from 药物发现剂)
EthicalComplianceReviewer（来自智能体工具）
ExperimentalDesignScorer（来自智能体工具）
HypothesisGenerator（来自智能体工具）
IntentAnalyzerAgent (from 文献检索工具)
KeywordExtractorAgent (from 文献检索工具)
LabelGenerator（来自智能体工具）
LiteratureContextReviewer（来自智能体工具）
LiteratureSynthesisAgent (from 药物发现剂)
MedicalLiteratureReviewer（来自：智能体工具）
MedicalTermNormalizer（来自智能体工具）
MethodologyRigorReviewer（来自智能体工具）
NoveltySignificanceReviewer（来自智能体工具）
OverallSummaryAgent (from 文献检索工具)
PackageAnalyzer (from Tool Discovery Agents)
ProtocolOptimizer（来自智能体工具）
QualityCheckerAgent (from 文献检索工具)
QuestionRephraser（来自智能体工具）
ReferenceInfoAnalyzer (from Tool Discovery Agents)
可复现性透明度审查员（来源：智能体工具）
ResultSummarizerAgent (from 文献检索工具)
结果解释审阅者（来自智能体工具）
ScientificTextSummarizer（来自智能体工具）
TestCaseGenerator (from Optimizer Tools)
TestResultsAnalyzer (from Tool Discovery Agents)
ToolCompatibilityAnalyzer（来自工具组成工具）
ToolMetadataGenerator（来自智能体工具）
ToolMetadataStandardizer（来自智能体工具）
ToolOutputSummarizer（来自输出摘要工具）
ToolQualityEvaluator（来自智能体工具）
ToolRelationshipDetector（来自智能体工具）
UnifiedToolGenerator (from Tool Discovery Agents)
WritingPresentationReviewer（来源于智能体工具）
XMLToolOptimizer (from Tool Discovery Agents)
call_agentic_human（来自智能体工具）

AgingCohortSearchTool (1 tools)¶

本地工具：

AgingCohort_search (from Aging Cohort Tools)

AllenBrainTool (4 tools)¶

本地工具：

AllenBrain_get_expression_datasets (from Allen Brain Tools)
AllenBrain_get_structure (from Allen Brain Tools)
AllenBrain_search_genes (from Allen Brain Tools)
AllenBrain_search_structures (from Allen Brain Tools)

AllianceGenomeTool (21 tools)¶

本地工具：

Alliance_get_disease (from Alliance Genome Tools)
Alliance_get_disease_genes (from Alliance Genome Tools)
Alliance_get_gene (from Alliance Genome Tools)
Alliance_get_gene_phenotypes (from Alliance Genome Tools)
Alliance_search_genes (from Alliance Genome Tools)
FlyBase_get_gene (from Flybase Tools)
FlyBase_get_gene_alleles (from Flybase Tools)
FlyBase_get_gene_disease_models (from Flybase Tools)
FlyBase_get_gene_expression (from Flybase Tools)
FlyBase_get_gene_interactions (from Flybase Tools)
FlyBase_get_gene_orthologs (from Flybase Tools)
MGI_get_gene (from Mgi Tools)
MGI_get_phenotypes (from Mgi Tools)
MGI_search_genes (from Mgi Tools)
ZFIN_get_allele (from Zfin Tools)
ZFIN_get_gene (from Zfin Tools)
ZFIN_get_gene_alleles (from Zfin Tools)
ZFIN_get_gene_expression (from Zfin Tools)
ZFIN_get_gene_orthologs (from Zfin Tools)
ZFIN_get_gene_phenotypes (from Zfin Tools)
ZFIN_search (from Zfin Tools)

AlphaFoldRESTTool（3 个工具）¶

本地工具：

alphafold_get_annotations（来自 Alphafold 工具）
alphafold_get_prediction（来自 Alphafold 工具）
alphafold_get_summary（来源：Alphafold 工具）

AlphaMissenseTool (3 tools)¶

本地工具：

AlphaMissense_get_protein_scores (from Alphamissense Tools)
AlphaMissense_get_residue_scores (from Alphamissense Tools)
AlphaMissense_get_variant_score (from Alphamissense Tools)

ArXivPDFSnippetsTool (1 tools)¶

本地工具：

ArXiv_get_pdf_snippets (from Arxiv 工具)

ArXivTool（1 个工具）¶

本地工具：

ArXiv_search_papers（来源：Arxiv 工具）

ArrayExpressRESTTool (4 tools)¶

本地工具：

arrayexpress_get_experiment (from Arrayexpress Tools)
arrayexpress_get_experiment_files (from Arrayexpress Tools)
arrayexpress_get_experiment_samples (from Arrayexpress Tools)
arrayexpress_search_experiments (from Arrayexpress Tools)

BRENDATool (5 tools)¶

本地工具：

BRENDA_get_enzyme_info (from Brenda Tools)
BRENDA_get_enzyme_kinetics (from Brenda Tools)
BRENDA_get_inhibitors (from Brenda Tools)
BRENDA_get_kcat (from Brenda Tools)
BRENDA_get_km (from Brenda Tools)

BVBRCTool (13 tools)¶

本地工具：

BVBRC_get_genome (from Bvbrc Tools)
BVBRC_get_protein_structure (from Bvbrc Tools)
BVBRC_get_taxonomy (from Bvbrc Tools)
BVBRC_search_amr (from Bvbrc Tools)
BVBRC_search_epitopes (from Bvbrc Tools)
BVBRC_search_genome_features (from Bvbrc Tools)
BVBRC_search_genomes (from Bvbrc Tools)
BVBRC_search_pathways (from Bvbrc Tools)
BVBRC_search_protein_structures (from Bvbrc Tools)
BVBRC_search_specialty_genes (from Bvbrc Tools)
BVBRC_search_subsystems (from Bvbrc Tools)
BVBRC_search_surveillance (from Bvbrc Tools)
BVBRC_search_taxonomy (from Bvbrc Tools)

BaseRESTTool (243 tools)¶

本地工具：

Anaconda_get_package (from Anaconda Tools)
Anaconda_search_packages (from Anaconda Tools)
ArtIC_get_artwork (from Artic Tools)
ArtIC_search_artworks (from Artic Tools)
BMRB_get_entries_by_pdb_id (from Bmrb Tools)
BMRB_get_entries_by_uniprot (from Bmrb Tools)
BMRB_get_entry (from Bmrb Tools)
BMRB_get_entry_citation (from Bmrb Tools)
BMRB_search_by_keyword (from Bmrb Tools)
BioRxiv_list_recent_preprints (from Biorxiv Ext Tools)
BioTools_get_tool (from Biotools Registry Tools)
BioTools_search (from Biotools Registry Tools)
BioTools_search_by_operation (from Biotools Registry Tools)
BioTools_search_by_topic (from Biotools Registry Tools)
BioTools_search_by_type (from Biotools Registry Tools)
Bioconductor_get_package (from Bioconductor Tools)
Bioconductor_search_packages (from Bioconductor Tools)
CEDA_search_datasets (from Ceda Tools)
CPIC_get_alleles (from Cpic Tools)
CPIC_get_drug_info (from Cpic Tools)
CPIC_get_gene_info (from Cpic Tools)
CPIC_list_drugs (from Cpic Tools)
CPIC_list_pgx_genes (from Cpic Tools)
CRAN_get_package (from Cran Tools)
CRAN_get_package_versions (from Cran Tools)
ChannelsDB_get_channels_cofactor (from Channelsdb Tools)
ChannelsDB_get_channels_pdb (from Channelsdb Tools)
CoL_get_children (from Col Tools)
CoL_get_taxon (from Col Tools)
CoL_search_species (from Col Tools)
DailyMed_search_drug_classes (from Clinical Guidelines Tools)
DataONE_search_datasets (from Dataone Tools)
Dataverse_get_dataset (from Dataverse Tools)
Dataverse_search_datasets (from Dataverse Tools)
DiseaseSH_get_covid_historical (from Disease Sh Ext Tools)
DiseaseSH_get_vaccine_coverage (from Disease Sh Ext Tools)
DiseaseSh_get_country_stats (from Diseasesh Tools)
DiseaseSh_get_global_stats (from Diseasesh Tools)
DiseaseSh_get_historical (from Diseasesh Tools)
Dryad_get_dataset (from Dryad Tools)
Dryad_get_dataset_files (from Dryad Tools)
Dryad_search_datasets (from Dryad Tools)
ELIXIRTeSS_search_events (from Elixir Tess Tools)
ELIXIRTeSS_search_materials (from Elixir Tess Tools)
EPMC_get_citations (from Europepmc Citations Tools)
EPMC_get_references (from Europepmc Citations Tools)
ERDDAP_get_dataset_info (from Erddap Tools)
ERDDAP_search_datasets (from Erddap Tools)
EVA_get_variants_by_gene (from Eva Tools)
EVA_get_variants_by_region (from Eva Tools)
EVA_list_studies (from Eva Tools)
Eurostat_get_dataset (from Eurostat Tools)
FPbase_get_protein (from Fpbase Tools)
FPbase_search_by_spectrum (from Fpbase Tools)
Figshare_get_article (from Figshare Tools)
Figshare_search_articles (from Figshare Tools)
FlyMine_search (from Flymine Tools)
FlyMine_search_genes (from Flymine Tools)
G2P_get_gene (from Gene2Phenotype Tools)
G2P_get_panel (from Gene2Phenotype Tools)
G2P_get_record (from Gene2Phenotype Tools)
G2P_search (from Gene2Phenotype Tools)
GBIF_get_species (from Gbif Ext Tools)
GBIF_suggest_species (from Gbif Ext Tools)
GeneNetwork_get_dataset_info (from Genenetwork Ext Tools)
GeneNetwork_get_sample_data (from Genenetwork Tools)
GeneNetwork_get_trait_info (from Genenetwork Ext Tools)
GeneNetwork_list_datasets (from Genenetwork Tools)
GeneNetwork_list_groups (from Genenetwork Tools)
GeneNetwork_list_species (from Genenetwork Tools)
GitHub_get_repository (from Github Tools)
GitHub_get_user_profile (from Github Tools)
GitHub_search_repositories (from Github Tools)
HuggingFace_get_model (from Huggingface Tools)
HuggingFace_search_datasets (from Huggingface Tools)
HuggingFace_search_models (from Huggingface Tools)
HumanMine_search (from Humanmine Tools)
HumanMine_search_genes (from Humanmine Tools)
HumanMine_search_pathways (from Humanmine Tools)
IDR_get_study (from Idr Tools)
IDR_get_study_datasets (from Idr Tools)
IDR_list_studies (from Idr Tools)
IdentifiersOrg_get_namespace (from Identifiers Org Tools)
IdentifiersOrg_list_namespaces (from Identifiers Org Tools)
IdentifiersOrg_resolve (from Identifiers Org Tools)
IdentifiersOrg_search_namespaces (from Identifiers Org Tools)
InspireHEP_search_papers (from Inspirehep Tools)
JPLHorizons_get_body_data (from Jpl Horizons Tools)
JPLHorizons_lookup_object (from Jpl Horizons Tools)
KLIFS_get_kinase (from Klifs Tools)
KLIFS_get_ligands (from Klifs Tools)
KLIFS_get_structures (from Klifs Tools)
KLIFS_get_structures_by_pdb (from Klifs Tools)
KLIFS_list_kinases (from Klifs Tools)
LOTUS_get_compound (from Lotus Tools)
LOTUS_search_by_inchikey (from Lotus Tools)
LOTUS_search_natural_products (from Lotus Tools)
LitVar_get_variant_publications (from Litvar Tools)
LitVar_search_variants (from Litvar Tools)
MAGICapp_get_guideline (from Clinical Guidelines Tools)
MAGICapp_get_recommendations (from Clinical Guidelines Tools)
MAGICapp_get_sections (from Clinical Guidelines Tools)
MAGICapp_list_guidelines (from Clinical Guidelines Tools)
MIBiG_get_stats (from Mibig Tools)
MIBiG_list_clusters (from Mibig Tools)
MSigDB_get_geneset (from Msigdb Tools)
MSigDB_get_hallmark_geneset (from Msigdb Tools)
MarineRegions_get_record (from Marine Regions Tools)
MarineRegions_search_by_name (from Marine Regions Tools)
MassBank_search_by_compound (from Massbank Tools)
MassBank_search_by_formula (from Massbank Tools)
MetNorway_get_forecast (from Metnorway Tools)
ModelDB_get_celltype (from Modeldb Tools)
ModelDB_get_model (from Modeldb Tools)
ModelDB_get_paper (from Modeldb Tools)
ModelDB_list_celltypes (from Modeldb Tools)
ModelDB_list_models (from Modeldb Tools)
MouseMine_search (from Mousemine Tools)
MouseMine_search_alleles (from Mousemine Tools)
MouseMine_search_genes (from Mousemine Tools)
NASACMR_search_collections (from Nasa Cmr Tools)
NASACMR_search_granules (from Nasa Cmr Tools)
NASAEONET_get_categories (from Nasa Eonet Tools)
NASAEONET_get_events (from Nasa Eonet Tools)
NASAExoplanet_query_planets (from Nasa Exoplanet Tools)
NASAExoplanet_query_stars (from Nasa Exoplanet Tools)
NASANED_lookup_object (from Nasa Ned Tools)
NASASBDB_close_approaches (from Nasa Sbdb Tools)
NASASBDB_get_body (from Nasa Sbdb Tools)
NASA_DONKI_get_coronal_mass_ejections (from Nasa Donki Tools)
NASA_DONKI_get_geomagnetic_storms (from Nasa Donki Tools)
NASA_DONKI_get_high_speed_streams (from Nasa Donki Tools)
NASA_DONKI_get_interplanetary_shocks (from Nasa Donki Tools)
NASA_DONKI_get_solar_energetic_particles (from Nasa Donki Tools)
NASA_DONKI_get_solar_flares (from Nasa Donki Tools)
NCBIGene_get_summary (from Ncbi Gene Tools)
NCBIGene_search (from Ncbi Gene Tools)
NCBIProtein_get_summary (from Ncbi Gene Tools)
NCIDrugDict_get_drug (from Nci Drugdict Tools)
NCIDrugDict_search (from Nci Drugdict Tools)
NCI_expand_drugs_by_letter (from Clinical Guidelines Tools)
NCI_get_drug_by_name (from Clinical Guidelines Tools)
NCI_search_cancer_resources (from Clinical Guidelines Tools)
NWS_get_active_alerts (from Nws Tools)
NWS_get_forecast (from Nws Tools)
NWS_get_point_metadata (from Nws Tools)
NeuroVault_get_collection (from Neurovault Tools)
NeuroVault_get_image (from Neurovault Tools)
NeuroVault_list_collection_images (from Neurovault Tools)
NeuroVault_list_collections (from Neurovault Tools)
Nominatim_geocode (from Nominatim Tools)
Nominatim_reverse_geocode (from Nominatim Tools)
OmicsDI_get_dataset (from Omicsdi Tools)
OmicsDI_get_statistics (from Omicsdi Tools)
OmicsDI_search_datasets (from Omicsdi Tools)
OpenCitations_get_citation_count (from Opencitations Tools)
OpenCitations_get_citations (from Opencitations Tools)
OpenCitations_get_references (from Opencitations Tools)
OpenFDA_search_device_510k (from Openfda Tools)
OpenFDA_search_device_enforcement (from Openfda Tools)
OpenFDA_search_drug_enforcement (from Openfda Tools)
OpenFDA_search_drug_labels (from Openfda Tools)
OpenFDA_search_drug_ndc (from Openfda Tools)
OpenFDA_search_food_enforcement (from Openfda Tools)
OpenFoodFacts_get_product (from Openfoodfacts Tools)
OpenFoodFacts_search_products (from Openfoodfacts Tools)
OpenML_get_dataset (from Openml Tools)
OpenML_search_datasets (from Openml Tools)
OpenMeteo_geocode_location (from Open Meteo Tools)
OpenMeteo_get_air_quality (from Open Meteo Tools)
OpenMeteo_get_air_quality (from Open Meteo Airquality Tools)
OpenMeteo_get_flood_forecast (from Open Meteo Flood Tools)
OpenMeteo_get_historical_climate (from Open Meteo Climate Tools)
OpenMeteo_get_historical_weather (from Open Meteo Tools)
OpenMeteo_get_marine_forecast (from Open Meteo Marine Tools)
OpenMeteo_get_weather_forecast (from Open Meteo Tools)
OpenTopoData_get_elevation (from Opentopodata Tools)
PDB_REDO_get_structure_quality (from Pdb Redo Tools)
PDBe_get_bound_molecules (from Pdbe Graph Tools)
PDBe_get_compound_details (from Pdbe Graph Tools)
PDBe_get_funpdbe_annotations (from Pdbe Graph Tools)
PDBe_get_uniprot_mappings (from Pdbe Graph Tools)
PDBe_get_uniprot_structure_coverage (from Pdbe Graph Tools)
POWO_get_taxon (from Powo Tools)
POWO_search_plants (from Powo Tools)
PanelApp_get_panel (from Panelapp Tools)
PanelApp_search_genes (from Panelapp Tools)
PanelApp_search_panels (from Panelapp Tools)
PharmVar_get_alleles (from Pharmvar Tools)
PharmVar_list_genes (from Pharmvar Tools)
PubTator3_get_annotations (from Pubtator3 Ext Tools)
RCSB_get_chemical_component (from Rcsb Chemcomp Tools)
ROR_get_organization (from Ror Tools)
ROR_search_organizations (from Ror Tools)
SDSS_sql_search (from Sdss Tools)
STRING_get_interaction_partners (from String Network Tools)
STRING_get_network (from String Network Tools)
ScanProsite_scan_protein (from Scanprosite Tools)
SemanticScholar_get_author (from Semantic Scholar Ext Tools)
SemanticScholar_get_paper (from Semantic Scholar Ext Tools)
SemanticScholar_get_recommendations (from Semantic Scholar Ext Tools)
SemanticScholar_search_authors (from Semantic Scholar Ext Tools)
SoilGrids_get_properties (from Soilgrids Tools)
SoilGrids_get_properties (from Soilgrids Tools)
SunriseSunset_get_times (from Sunrise Sunset Tools)
TCIA_get_body_part_values (from Tcia Tools)
TCIA_get_modality_values (from Tcia Tools)
TCIA_get_patient_studies (from Tcia Tools)
TCIA_get_series (from Tcia Tools)
TCIA_get_series_metadata (from Tcia Tools)
TCIA_get_series_size (from Tcia Tools)
TCIA_list_collections (from Tcia Tools)
TargetMine_search (from Targetmine Tools)
TargetMine_search_genes (from Targetmine Tools)
USCensus_get_population (from Uscensus Tools)
USGSWater_get_streamflow (from Usgs Water Tools)
USGSWater_get_water_level (from Usgs Water Tools)
USGSWater_get_water_temperature (from Usgs Water Tools)
USGS_get_earthquake_feed (from Usgs Earthquake Tools)
USGS_query_earthquakes (from Usgs Earthquake Tools)
UniProt_get_proteome (from Uniprot Proteomes Tools)
UniProt_search_proteomes (from Uniprot Proteomes Tools)
VEuPathDB_list_gene_searches (from Veupathdb Tools)
VEuPathDB_list_organism_searches (from Veupathdb Tools)
VEuPathDB_list_record_types (from Veupathdb Tools)
VariantValidator_gene2transcripts (from Variant Validator Tools)
VariantValidator_validate_variant (from Variant Validator Tools)
WAQI_get_air_quality (from Waqi Tools)
WHOGHO_get_indicator_data (from Who Gho Tools)
WHOGHO_search_indicators (from Who Gho Tools)
Wikidata_get_entity (from Wikidata Entity Tools)
Wikidata_search_entities (from Wikidata Entity Tools)
Wikipedia_get_featured_content (from Wikipedia Ext Tools)
WorldBank_get_country (from Worldbank Tools)
WorldBank_get_indicator (from Worldbank Tools)
WorldBank_search_indicators (from Worldbank Tools)
eBird_get_taxon_groups (from Ebird Taxonomy Tools)
eBird_get_taxonomy (from Ebird Taxonomy Tools)
eQTL_get_associations (from Eqtl Tools)
eQTL_list_datasets (from Eqtl Tools)
iCite_get_publications (from Icite Tools)
iDigBio_search_records (from Idigbio Tools)
scite_get_tallies (from Scite Tools)

BgeeTool (3 tools)¶

本地工具：

Bgee_get_gene_expression (from Bgee Tools)
Bgee_list_species (from Bgee Tools)
Bgee_search_genes (from Bgee Tools)

BiGGModelsTool (7 tools)¶

本地工具：

BiGG_get_database_version (from Bigg Models Tools)
BiGG_get_metabolite (from Bigg Models Tools)
BiGG_get_model (from Bigg Models Tools)
BiGG_get_model_reactions (from Bigg Models Tools)
BiGG_get_reaction (from Bigg Models Tools)
BiGG_list_models (from Bigg Models Tools)
BiGG_search (from Bigg Models Tools)

BinaryDownloadTool (1 tools)¶

本地工具：

download_binary_file (from File Download Tools)

BindingDBTool (5 tools)¶

本地工具：

BindingDB_get_ligands_by_pdb (from Bindingdb Tools)
BindingDB_get_ligands_by_uniprot (from Bindingdb Tools)
BindingDB_get_ligands_by_uniprots (from Bindingdb Tools)
BindingDB_get_targets_by_compound (from Bindingdb Tools)
BindingDB_search_by_target (from Bindingdb Tools)

BioGRIDRESTTool (4 tools)¶

本地工具：

BioGRID_get_chemical_interactions (from Biogrid Tools)
BioGRID_get_interactions (from Biogrid Tools)
BioGRID_get_ptms (from Biogrid Tools)
BioGRID_search_by_pubmed (from Biogrid Tools)

BioImageArchiveTool (3 tools)¶

本地工具：

BioImageArchive_get_study (from Bioimage Archive Tools)
BioImageArchive_search_bioimages (from Bioimage Archive Tools)
BioImageArchive_search_studies (from Bioimage Archive Tools)

BioModelsRESTTool (5 tools)¶

本地工具：

BioModels_download_model (from Biomodels Tools)
BioModels_get_model (from Biomodels Tools)
BioModels_list_files (from Biomodels Tools)
BioModels_search_parameters (from Biomodels Tools)
biomodels_search (from Biomodels Tools)

BioPortalTool (4 tools)¶

本地工具：

BioPortal_annotate_text (from Bioportal Tools)
BioPortal_get_concept (from Bioportal Tools)
BioPortal_get_hierarchy (from Bioportal Tools)
BioPortal_search_ontology_terms (from Bioportal Tools)

BioRxivTool (2 tools)¶

本地工具：

BioRxiv_get_preprint (from Biorxiv 工具)
MedRxiv_get_preprint (from Medrxiv 工具)

BioSamplesTool (3 tools)¶

本地工具：

BioSamples_get_sample (from Biosamples Tools)
BioSamples_search (from Biosamples Tools)
BioSamples_search_by_filter (from Biosamples Tools)

BioStudiesRESTTool (4 tools)¶

本地工具：

biostudies_get_study (from Biostudies Tools)
biostudies_get_study_files (from Biostudies Tools)
biostudies_search (from Biostudies Tools)
biostudies_search_by_collection (from Biostudies Tools)

BioregistryTool (3 tools)¶

本地工具：

Bioregistry_get_registry (from Bioregistry Tools)
Bioregistry_resolve_reference (from Bioregistry Tools)
Bioregistry_search_registries (from Bioregistry Tools)

BridgeDbTool (3 tools)¶

本地工具：

BridgeDb_attributes (from Bridgedb Tools)
BridgeDb_search (from Bridgedb Tools)
BridgeDb_xrefs (from Bridgedb Tools)

CADDTool (3 tools)¶

本地工具：

CADD_get_position_scores (from Cadd Tools)
CADD_get_range_scores (from Cadd Tools)
CADD_get_variant_score (from Cadd Tools)

CATHTool (4 tools)¶

本地工具：

CATH_get_domain_summary (from Cath Tools)
CATH_get_funfam (from Cath Tools)
CATH_get_superfamily (from Cath Tools)
CATH_list_funfams (from Cath Tools)

CBioPortalRESTTool (13 tools)¶

本地工具：

cBioPortal_get_cancer_studies (from Cbioportal Tools)
cBioPortal_get_cancer_types (from Cbioportal Tools)
cBioPortal_get_clinical_attributes (from Cbioportal Tools)
cBioPortal_get_clinical_data (from Cbioportal Tools)
cBioPortal_get_gene_info (from Cbioportal Tools)
cBioPortal_get_gene_panel_genes (from Cbioportal Tools)
cBioPortal_get_gene_panels (from Cbioportal Tools)
cBioPortal_get_genes (from Cbioportal Tools)
cBioPortal_get_molecular_profiles (from Cbioportal Tools)
cBioPortal_get_mutations (from Cbioportal Tools)
cBioPortal_get_patients (from Cbioportal Tools)
cBioPortal_get_sample_lists (from Cbioportal Tools)
cBioPortal_get_samples (from Cbioportal Tools)

CDCRESTTool (2 tools)¶

本地工具：

cdc_data_get_dataset (from Cdc Tools)
cdc_data_search_datasets (from Cdc Tools)

CELLxGENECensusTool (7 tools)¶

本地工具：

CELLxGENE_download_h5ad (from Cellxgene Census Tools)
CELLxGENE_get_cell_metadata (from Cellxgene Census Tools)
CELLxGENE_get_census_versions (from Cellxgene Census Tools)
CELLxGENE_get_embeddings (from Cellxgene Census Tools)
CELLxGENE_get_expression_data (from Cellxgene Census Tools)
CELLxGENE_get_gene_metadata (from Cellxgene Census Tools)
CELLxGENE_get_presence_matrix (from Cellxgene Census Tools)

CIViCTool (12 tools)¶

本地工具：

civic_get_assertion (from Civic Tools)
civic_get_evidence_item (from Civic Tools)
civic_get_molecular_profile (from Civic Tools)
civic_get_variant (from Civic Tools)
civic_get_variants_by_gene (from Civic Tools)
civic_search_assertions (from Civic Tools)
civic_search_diseases (from Civic Tools)
civic_search_evidence_items (from Civic Tools)
civic_search_genes (from Civic Tools)
civic_search_molecular_profiles (from Civic Tools)
civic_search_therapies (from Civic Tools)
civic_search_variants (from Civic Tools)

CMAGuidelinesTool (1 tools)¶

本地工具：

CMA_Guidelines_Search (from 统一指南工具)

CODTool (2 tools)¶

本地工具：

COD_get_structure (from Cod Crystal Tools)
COD_search_structures (from Cod Crystal Tools)

COSMICTool (2 tools)¶

本地工具：

COSMIC_get_mutations_by_gene (from Cosmic Tools)
COSMIC_search_mutations (from Cosmic Tools)

CPICGetRecommendationsTool (1 tools)¶

本地工具：

CPIC_get_recommendations (from Cpic Tools)

CPICListGuidelinesTool (1 tools)¶

本地工具：

CPIC_list_guidelines (from Cpic Tools)

CPICSearchPairsTool (2 tools)¶

本地工具：

CPIC_get_gene_drug_pairs (from Cpic Tools)
CPIC_search_gene_drug_pairs (from Cpic Tools)

CTDTool (5 tools)¶

本地工具：

CTD_get_chemical_diseases (from Ctd Tools)
CTD_get_chemical_gene_interactions (from Ctd Tools)
CTD_get_disease_chemicals (from Ctd Tools)
CTD_get_gene_chemicals (from Ctd Tools)
CTD_get_gene_diseases (from Ctd Tools)

CTFPHCListGuidelinesTool (1 tools)¶

本地工具：

CTFPHC_list_guidelines (from 统一指南工具)

CTFPHCSearchGuidelinesTool (1 tools)¶

本地工具：

CTFPHC_search_guidelines (from 统一指南工具)

CancerPrognosisTool (4 tools)¶

本地工具：

CancerPrognosis_get_gene_expression (from Cancer Prognosis Tools)
CancerPrognosis_get_study_summary (from Cancer Prognosis Tools)
CancerPrognosis_get_survival_data (from Cancer Prognosis Tools)
CancerPrognosis_search_studies (from Cancer Prognosis Tools)

CancerVarTool (1 tools)¶

本地工具：

CancerVar_classify_variant (from Cancervar Tools)

CellMarkerTool (4 tools)¶

本地工具：

CellMarker_list_cell_types (from Cellmarker Tools)
CellMarker_search_by_cell_type (from Cellmarker Tools)
CellMarker_search_by_gene (from Cellmarker Tools)
CellMarker_search_cancer_markers (from Cellmarker Tools)

CellPaintingTool (3 tools)¶

本地工具：

CellPainting_get_screen_plates (from Cellpainting Tools)
CellPainting_get_well_data (from Cellpainting Tools)
CellPainting_search_screens (from Cellpainting Tools)

CellosaurusGetCellLineInfoTool (1 tools)¶

本地工具：

cellosaurus_get_cell_line_info (from Cellosaurus 工具)

CellosaurusQueryConverterTool (1 tools)¶

本地工具：

cellosaurus_query_converter (from Cellosaurus 工具)

CellosaurusSearchTool (1 tools)¶

本地工具：

cellosaurus_search_cell_lines (from Cellosaurus 工具)

CellxGeneDiscoveryTool (3 tools)¶

本地工具：

CxGDisc_get_collection (from Cellxgene Discovery Tools)
CxGDisc_list_collections (from Cellxgene Discovery Tools)
CxGDisc_search_datasets (from Cellxgene Discovery Tools)

ChEBITool (3 tools)¶

本地工具：

ChEBI_get_compound (from Chebi Tools)
ChEBI_get_ontology_children (from Chebi Tools)
ChEBI_search (from Chebi Tools)

ChEMBLRESTTool (28 tools)¶

本地工具：

ChEMBL_get_activity (from Chembl 工具)
ChEMBL_get_assay (from Chembl 工具)
ChEMBL_get_assay_activities (from Chembl 工具)
ChEMBL_get_compound_record (from Chembl 工具)
ChEMBL_get_compound_record_activities (from Chembl 工具)
ChEMBL_get_drug (from Chembl 工具)
ChEMBL_get_drug_mechanisms (from Chembl 工具)
ChEMBL_get_molecule (from Chembl 工具)
ChEMBL_get_molecule_image (from Chembl 工具)
ChEMBL_get_molecule_targets (from Chembl 工具)
ChEMBL_get_target (from Chembl 工具)
ChEMBL_get_target_activities (from Chembl 工具)
ChEMBL_get_target_assays (from Chembl 工具)
ChEMBL_search_activities (from Chembl 工具)
ChEMBL_search_assays (from Chembl 工具)
ChEMBL_search_atc_classification (from Chembl 工具)
ChEMBL_search_binding_sites (from Chembl 工具)
ChEMBL_search_cell_lines (from Chembl 工具)
ChEMBL_search_compound_structural_alerts (from Chembl 工具)
ChEMBL_search_documents (from Chembl 工具)
ChEMBL_search_drugs (from Chembl 工具)
ChEMBL_search_mechanisms (from Chembl 工具)
ChEMBL_search_molecules (from Chembl 工具)
ChEMBL_search_protein_classification (from Chembl 工具)
ChEMBL_search_similarity (from Chembl 工具)
ChEMBL_search_substructure (from Chembl 工具)
ChEMBL_search_targets (from Chembl 工具)
ChEMBL_search_tissue (from Chembl 工具)

ChEMBLTool（1 个工具）¶

本地工具：

ChEMBL_search_similar_molecules（来自 Chembl 工具）

ChIPAtlasTool (4 tools)¶

本地工具：

ChIPAtlas_enrichment_analysis (from Chipatlas Tools)
ChIPAtlas_get_experiments (from Chipatlas Tools)
ChIPAtlas_get_peak_data (from Chipatlas Tools)
ChIPAtlas_search_datasets (from Chipatlas Tools)

ChemComputeTool (1 tools)¶

本地工具：

Chem_sa_score (from Chem Compute Tools)

ClinGenARTool (2 tools)¶

本地工具：

ClinGenAR_get_external_records (from Clingen Ar Tools)
ClinGenAR_lookup_allele (from Clingen Ar Tools)

ClinGenAlleleTool (2 tools)¶

本地工具：

ClinGenAllele_get_allele (from Clingen Allele Tools)
ClinGenAllele_lookup_hgvs (from Clingen Allele Tools)

ClinGenDosageTool (2 tools)¶

本地工具：

ClinGen_dosage_by_gene (from Clingen Dosage Api Tools)
ClinGen_dosage_region_search (from Clingen Dosage Api Tools)

ClinGenTool (8 tools)¶

本地工具：

ClinGen_get_actionability_adult (from Clingen Tools)
ClinGen_get_actionability_pediatric (from Clingen Tools)
ClinGen_get_dosage_sensitivity (from Clingen Tools)
ClinGen_get_gene_validity (from Clingen Tools)
ClinGen_get_variant_classifications (from Clingen Tools)
ClinGen_search_actionability (from Clingen Tools)
ClinGen_search_dosage_sensitivity (from Clingen Tools)
ClinGen_search_gene_validity (from Clingen Tools)

ClinVarGetClinicalSignificance (1 tools)¶

本地工具：

ClinVar_get_clinical_significance (from Clinvar Tools)

ClinVarGetVariantDetails (1 tools)¶

本地工具：

ClinVar_get_variant_details (from Clinvar Tools)

ClinVarSearchVariants (1 tools)¶

本地工具：

ClinVar_search_variants (from Clinvar Tools)

ClinicalTrialsDetailsTool（9 个工具）¶

本地工具：

extract_clinical_trial_adverse_events（来源：Clinicaltrials Gov 工具）
extract_clinical_trial_outcomes（来自 Clinicaltrials Gov 工具）
get_clinical_trial_conditions_and_interventions（来源：Clinicaltrials Gov 工具）
get_clinical_trial_descriptions（来自 Clinicaltrials Gov 工具）
get_clinical_trial_eligibility_criteria（来自 Clinicaltrials Gov 工具）
get_clinical_trial_locations（来自 Clinicaltrials Gov 工具）
get_clinical_trial_outcome_measures（来自 Clinicaltrials Gov 工具）
get_clinical_trial_references（来自 Clinicaltrials Gov 工具）
get_clinical_trial_status_and_dates（来自 Clinicaltrials Gov 工具）

ClinicalTrialsSearchTool（1 个工具）¶

本地工具：

search_clinical_trials（来自 Clinicaltrials Gov 工具）

ClinicalTrialsTool (6 tools)¶

本地工具：

ClinicalTrials_get_database_stats (from Clinicaltrials Gov 工具)
ClinicalTrials_get_field_values (from Clinicaltrials Gov 工具)
ClinicalTrials_get_study (from Clinicaltrials Gov 工具)
ClinicalTrials_search_by_intervention (from Clinicaltrials Gov 工具)
ClinicalTrials_search_by_sponsor (from Clinicaltrials Gov 工具)
ClinicalTrials_search_studies (from Clinicaltrials Gov 工具)

ClueTool (5 tools)¶

本地工具：

CLUE_get_cell_lines (from Clue Tools)
CLUE_get_gene_expression (from Clue Tools)
CLUE_get_perturbation (from Clue Tools)
CLUE_search_compounds (from Clue Tools)
CLUE_search_signatures (from Clue Tools)

ComplexPortalTool (2 tools)¶

本地工具：

ComplexPortal_get_complex (from Complex Portal Tools)
ComplexPortal_search_complexes (from Complex Portal Tools)

ComposeTool (11 tools)¶

本地工具：

BiomarkerDiscoveryWorkflow（来自：撰写工具）
ComprehensiveDrugDiscoveryPipeline（来自撰写工具）
DrugSafetyAnalyzer（来自撰写工具）
LiteratureSearchTool（来自撰写工具）
MultiAgentLiteratureSearch (from 文献检索工具)
OutputSummarizationComposer（来自输出摘要工具）
ToolDescriptionOptimizer (from Optimizer Tools)
ToolDiscover (from Tool Discovery Agents)
ToolGraphComposer（来自工具组成工具）
ToolGraphGenerationPipeline（来自撰写工具）
ToolMetadataGenerationPipeline（来自撰写工具）

CorePDFSnippetsTool (1 tools)¶

本地工具：

CORE_get_fulltext_snippets (from 核心工具)

CoreTool（1 个工具）¶

本地工具：

CORE_search_papers（来自：核心工具）

CrossrefRESTTool (6 tools)¶

本地工具：

Crossref_get_funder (from Crossref 工具)
Crossref_get_journal (from Crossref 工具)
Crossref_get_work (from Crossref 工具)
Crossref_list_funders (from Crossref 工具)
Crossref_list_types (from Crossref 工具)
Crossref_search_works（来源：Crossref 工具）

CryoETTool (5 tools)¶

本地工具：

CryoET_get_dataset (from Cryoet Tools)
CryoET_list_annotations (from Cryoet Tools)
CryoET_list_datasets (from Cryoet Tools)
CryoET_list_runs (from Cryoet Tools)
CryoET_list_tomograms (from Cryoet Tools)

CrystalStructureTool (1 tools)¶

本地工具：

CrystalStructure_validate (from Crystal Structure Tools)

DBLPTool（1 个工具）¶

本地工具：

DBLP_search_publications（来自 Dblp 工具）

DBpediaSPARQLTool (1 tools)¶

本地工具：

DBpedia_SPARQL_query (from Dbpedia Tools)

DGIdbTool (4 tools)¶

本地工具：

DGIdb_get_drug_gene_interactions (from Dgidb Tools)
DGIdb_get_drug_info (from Dgidb Tools)
DGIdb_get_gene_druggability (from Dgidb Tools)
DGIdb_get_gene_info (from Dgidb Tools)

DNATool (10 tools)¶

本地工具：

DNA_calculate_gc_content (from Dna Tools)
DNA_codon_optimize (from Dna Tools)
DNA_find_orfs (from Dna Tools)
DNA_find_restriction_sites (from Dna Tools)
DNA_gibson_design (from Dna Tools)
DNA_golden_gate_design (from Dna Tools)
DNA_primer_design (from Dna Tools)
DNA_reverse_complement (from Dna Tools)
DNA_translate_sequence (from Dna Tools)
DNA_virtual_digest (from Dna Tools)

DOAJTool（1 个工具）¶

本地工具：

DOAJ_search_articles（来源：Doaj 工具）

DailyMedSPLParserTool (5 tools)¶

本地工具：

DailyMed_parse_adverse_reactions (from Dailymed 工具)
DailyMed_parse_clinical_pharmacology (from Dailymed 工具)
DailyMed_parse_contraindications (from Dailymed 工具)
DailyMed_parse_dosing (from Dailymed 工具)
DailyMed_parse_drug_interactions (from Dailymed 工具)

DataCiteRESTTool (4 tools)¶

本地工具：

DataCite_get_dataset (from Datacite Tools)
DataCite_get_doi (from Datacite Tools)
DataCite_search_datasets (from Datacite Tools)
DataCite_search_dois (from Datacite Tools)

DataGovTool (1 tools)¶

本地工具：

DataGov_search_datasets (from Datagov Tools)

DataQualityTool (1 tools)¶

本地工具：

DataQuality_assess (from Data Quality Tools)

DatasetTool（7 个工具）¶

本地工具：

dict_search（来自数据集工具）
dili_search（来自数据集工具）
diqt_search（来自数据集工具）
drugbank_full_search（来自：数据集工具）
drugbank_links_search（来自数据集工具）
drugbank_vocab_filter（来自数据集工具）
drugbank_vocab_search（来自数据集工具）

DbfetchRESTTool (4 tools)¶

本地工具：

dbfetch_fetch_batch (from Dbfetch Tools)
dbfetch_fetch_entry (from Dbfetch Tools)
dbfetch_list_databases (from Dbfetch Tools)
dbfetch_list_formats (from Dbfetch Tools)

DeepGOTool (1 tools)¶

本地工具：

DeepGO_predict_function (from Deepgo Tools)

DegreesOfUnsaturationTool (1 tools)¶

本地工具：

DegreesOfUnsaturation_calculate (from Degrees Of Unsaturation Tools)

DepMapTool (5 tools)¶

本地工具：

DepMap_get_cell_line (from Depmap 工具)
DepMap_get_cell_lines (from Depmap 工具)
DepMap_get_gene_dependencies (from Depmap 工具)
DepMap_search_cell_lines (from Depmap 工具)
DepMap_search_genes (from Depmap 工具)

DfamTool (3 tools)¶

本地工具：

Dfam_get_annotations (from Dfam Tools)
Dfam_get_family (from Dfam Tools)
Dfam_search_families (from Dfam Tools)

DisGeNETTool (5 tools)¶

本地工具：

DisGeNET_get_disease_genes (from Disgenet Tools)
DisGeNET_get_gda (from Disgenet Tools)
DisGeNET_get_vda (from Disgenet Tools)
DisGeNET_search_disease (from Disgenet Tools)
DisGeNET_search_gene (from Disgenet Tools)

DisProtTool (2 tools)¶

本地工具：

DisProt_get_entry (from Disprot Tools)
DisProt_search (from Disprot Tools)

DiseaseOntologyTool (2 tools)¶

本地工具：

DiseaseOntology_get_parents (from Disease Ontology Tools)
DiseaseOntology_get_term (from Disease Ontology Tools)

疾病靶点评分工具（10个工具）¶

本地工具：

癌症_生物标志物_疾病_靶点_评分（来自疾病靶点评分工具）
cancer_gene_census_disease_target_score（来源：疾病靶点评分工具）
chembl_disease_target_score（来自疾病靶点评分工具）
disease_target_score（来自疾病靶点评分工具）
europepmc_disease_target_score（来源：疾病靶点评分工具）
eva_disease_target_score（来自：疾病靶点评分工具）
eva_somatic_disease_target_score（来源：疾病靶点评分工具）
expression_atlas_disease_target_score（来自疾病靶点评分工具）
genomics_england_disease_target_score（来自：疾病靶点评分工具）
reactome_disease_target_score（来自：疾病靶点评分工具）

DoseResponseTool (3 tools)¶

本地工具：

DoseResponse_calculate_ic50 (from Dose Response Tools)
DoseResponse_compare_potency (from Dose Response Tools)
DoseResponse_fit_curve (from Dose Response Tools)

DrugCentralTool (3 tools)¶

本地工具：

DrugCentral_get_drug (from Drugcentral Tools)
DrugCentral_get_targets (from Drugcentral Tools)
DrugCentral_search (from Drugcentral Tools)

DrugPropertiesTool (3 tools)¶

本地工具：

DrugProps_calculate_qed (from Drug Properties Tools)
DrugProps_lipinski_filter (from Drug Properties Tools)
DrugProps_pains_filter (from Drug Properties Tools)

DrugSynergyTool (5 tools)¶

本地工具：

DrugSynergy_calculate_bliss (from Drug Synergy Tools)
DrugSynergy_calculate_ci (from Drug Synergy Tools)
DrugSynergy_calculate_hsa (from Drug Synergy Tools)
DrugSynergy_calculate_loewe (from Drug Synergy Tools)
DrugSynergy_calculate_zip (from Drug Synergy Tools)

DynaMut2Tool (2 tools)¶

本地工具：

DynaMut2_get_job (from Dynamut2 Tools)
DynaMut2_predict_stability (from Dynamut2 Tools)

DynamicPackageDiscovery (1 tools)¶

本地工具：

dynamic_package_discovery (from Package Discovery Tools)

EBIProteinsCoordinatesTool (1 tools)¶

本地工具：

EBIProteins_get_coordinate_mapping (from Ebi Proteins Coordinates Tools)

EBIProteinsEpitopeTool (1 tools)¶

本地工具：

EBIProteins_get_epitopes (from Ebi Proteins Epitope Tools)

EBIProteinsExtTool (7 tools)¶

本地工具：

EBIProteins_get_antigen (from Ebi Proteins Ext Tools)
EBIProteins_get_coordinates (from Ebi Proteins Ext Tools)
EBIProteins_get_features (from Ebi Proteins Ext Tools)
EBIProteins_get_mutagenesis (from Ebi Proteins Ext Tools)
EBIProteins_get_proteomics_peptides (from Ebi Proteins Ext Tools)
EBIProteins_get_proteomics_ptm (from Ebi Proteins Ext Tools)
EBIProteins_get_variation (from Ebi Proteins Ext Tools)

EBIProteinsFeaturesTool (3 tools)¶

本地工具：

EBIProteins_get_domains_sites (from Ebi Proteins Features Tools)
EBIProteins_get_molecule_processing (from Ebi Proteins Features Tools)
EBIProteins_get_structural_features (from Ebi Proteins Features Tools)

EBIProteinsInteractionsTool (2 tools)¶

本地工具：

EBIProteins_get_interaction_details (from Ebi Proteins Interactions Tools)
EBIProteins_get_interactions (from Ebi Proteins Interactions Tools)

EBISearchRESTTool (7 tools)¶

本地工具：

ebi_cross_reference_search (from Ebi Search Tools)
ebi_get_domain_fields (from Ebi Search Tools)
ebi_get_domain_info (from Ebi Search Tools)
ebi_get_entry (from Ebi Search Tools)
ebi_list_domains (from Ebi Search Tools)
ebi_search_domain (from Ebi Search Tools)
ebi_search_with_facets (from Ebi Search Tools)

EBITaxonomyTool (4 tools)¶

本地工具：

EBITaxonomy_get_by_id (from Ebi Taxonomy Tools)
EBITaxonomy_get_by_scientific_name (from Ebi Taxonomy Tools)
EBITaxonomy_search_by_name (from Ebi Taxonomy Tools)
EBITaxonomy_suggest (from Ebi Taxonomy Tools)

EFOTool（1 个工具）¶

本地工具：

OSL_get_efo_id_by_disease_name（来源：Efo 工具）

ELMTool (2 tools)¶

本地工具：

ELM_get_instances (from Elm Tools)
ELM_list_classes (from Elm Tools)

EMDBRESTTool (7 tools)¶

本地工具：

EMDB_get_imaging_info (from Emdb Tools)
EMDB_get_map_info (from Emdb Tools)
EMDB_get_publications (from Emdb Tools)
EMDB_get_sample_info (from Emdb Tools)
EMDB_get_structure (from Emdb Tools)
EMDB_get_validation (from Emdb Tools)
EMDB_search_structures (from Emdb Tools)

EMPIARTool (2 tools)¶

本地工具：

EMPIAR_get_entry (from Empiar Tools)
EMPIAR_search_entries (from Empiar Tools)

EMoleculesTool (4 tools)¶

本地工具：

eMolecules_get_compound (from Emolecules Tools)
eMolecules_get_vendors (from Emolecules Tools)
eMolecules_search (from Emolecules Tools)
eMolecules_search_smiles (from Emolecules Tools)

ENABrowserRESTTool (6 tools)¶

本地工具：

ena_get_entry (from Ena Browser Tools)
ena_get_entry_history (from Ena Browser Tools)
ena_get_entry_summary (from Ena Browser Tools)
ena_get_sequence_embl (from Ena Browser Tools)
ena_get_sequence_fasta (from Ena Browser Tools)
ena_get_sequence_xml (from Ena Browser Tools)

ENAPortalTool (3 tools)¶

本地工具：

ENAPortal_count_records (from Ena Portal Tools)
ENAPortal_search_samples (from Ena Portal Tools)
ENAPortal_search_studies (from Ena Portal Tools)

ENCODEFilesTool (1 tools)¶

本地工具：

ENCODE_list_files (from Encode Tools)

ENCODERESTTool (3 tools)¶

本地工具：

ENCODE_get_biosample (from Encode Tools)
ENCODE_get_experiment (from Encode Tools)
ENCODE_get_file (from Encode Tools)

ENCODESearchBiosamplesTool (1 tools)¶

本地工具：

ENCODE_search_biosamples (from Encode Tools)

ENCODESearchTool (1 tools)¶

本地工具：

ENCODE_search_experiments (from Encode Tools)

EOLTool (4 tools)¶

本地工具：

EOL_get_collection (from Eol Tools)
EOL_get_hierarchy_entry (from Eol Tools)
EOL_get_page (from Eol Tools)
EOL_search_species (from Eol Tools)

EPMCAnnotationsTool (5 tools)¶

本地工具：

EPMC_get_article_chemicals (from Epmc Annotations Tools)
EPMC_get_article_diseases (from Epmc Annotations Tools)
EPMC_get_article_genes (from Epmc Annotations Tools)
EPMC_get_article_organisms (from Epmc Annotations Tools)
EPMC_get_text_mined_annotations (from Epmc Annotations Tools)

ESMFoldTool (1 tools)¶

本地工具：

ESMFold_predict_structure (from Esmfold Tools)

ESMTool (4 tools)¶

本地工具：

ESM_fold_protein (from Esm Tools)
ESM_generate_protein_sequence (from Esm Tools)
ESM_get_protein_embedding (from Esm Tools)
ESM_score_sequence (from Esm Tools)

EVETool (2 tools)¶

本地工具：

EVE_get_gene_info (from Eve Tools)
EVE_get_variant_score (from Eve Tools)

EmbeddingDatabase (3 tools)¶

本地工具：

embedding_database_add（来自：嵌入工具）
embedding_database_create（来源：嵌入工具）
embedding_database_search（来自：嵌入工具）

EmbeddingSync（2 个工具）¶

本地工具：

embedding_sync_download（来源：嵌入工具）
embedding_sync_upload（来自：嵌入工具）

EnamineTool (4 tools)¶

本地工具：

Enamine_get_compound (from Enamine Tools)
Enamine_get_libraries (from Enamine Tools)
Enamine_search_catalog (from Enamine Tools)
Enamine_search_smiles (from Enamine Tools)

EnrichrExtTool (3 tools)¶

本地工具：

Enrichr_enrich (from Enrichr Ext Tools)
Enrichr_get_top_enriched (from Enrichr Ext Tools)
Enrichr_list_libraries (from Enrichr Ext Tools)

EnrichrTool（1 个工具）¶

本地工具：

enrichr_gene_enrichment_analysis（来自 Enrichr 工具）

EnsemblArchiveTool (2 tools)¶

本地工具：

EnsemblArchive_batch_lookup (from Ensembl Archive Tools)
EnsemblArchive_get_id_history (from Ensembl Archive Tools)

EnsemblComparaTool (3 tools)¶

本地工具：

EnsemblCompara_get_gene_tree (from Ensembl Compara Tools)
EnsemblCompara_get_orthologues (from Ensembl Compara Tools)
EnsemblCompara_get_paralogues (from Ensembl Compara Tools)

EnsemblInfoTool (2 tools)¶

本地工具：

Ensembl_get_assembly_info (from Ensembl Info Tools)
Ensembl_get_species_info (from Ensembl Info Tools)

EnsemblLDTool (2 tools)¶

本地工具：

EnsemblLD_get_ld_pairwise (from Ensembl Ld Tools)
EnsemblLD_get_ld_variants (from Ensembl Ld Tools)

EnsemblMapTool (2 tools)¶

本地工具：

EnsemblMap_convert_coordinates (from Ensembl Map Tools)
EnsemblMap_translate_coordinates (from Ensembl Map Tools)

EnsemblOverlapTool (2 tools)¶

本地工具：

Ensembl_get_gene_overlapping_features (from Ensembl Overlap Tools)
Ensembl_get_region_features (from Ensembl Overlap Tools)

EnsemblPhenotypeTool (3 tools)¶

本地工具：

EnsemblPheno_get_by_gene (from Ensembl Phenotype Tools)
EnsemblPheno_get_by_region (from Ensembl Phenotype Tools)
EnsemblPheno_get_by_variant (from Ensembl Phenotype Tools)

EnsemblRESTTool (21 tools)¶

本地工具：

ensembl_get_alignment (from Ensembl Tools)
ensembl_get_archive (from Ensembl Tools)
ensembl_get_genetree (from Ensembl Tools)
ensembl_get_homology (from Ensembl Tools)
ensembl_get_ontology_ancestors (from Ensembl Tools)
ensembl_get_ontology_descendants (from Ensembl Tools)
ensembl_get_ontology_term (from Ensembl Tools)
ensembl_get_overlap_features (from Ensembl Tools)
ensembl_get_regulatory_features (from Ensembl Tools)
ensembl_get_sequence (from Ensembl Tools)
ensembl_get_species (from Ensembl Tools)
ensembl_get_structural_variants (from Ensembl Tools)
ensembl_get_sv_detail (from Ensembl Tools)
ensembl_get_taxonomy (from Ensembl Tools)
ensembl_get_variants (from Ensembl Tools)
ensembl_get_variation (from Ensembl Tools)
ensembl_get_variation_phenotypes (from Ensembl Tools)
ensembl_get_xrefs (from Ensembl Tools)
ensembl_get_xrefs_by_name (from Ensembl Tools)
ensembl_lookup_gene (from Ensembl Tools)
ensembl_vep_region (from Ensembl Tools)

EnsemblRegulationTool (3 tools)¶

本地工具：

EnsemblReg_get_binding_matrix (from Ensembl Regulation Tools)
EnsemblReg_get_constrained_elements (from Ensembl Regulation Tools)
EnsemblReg_get_motif_features (from Ensembl Regulation Tools)

EnsemblSequenceTool (2 tools)¶

本地工具：

EnsemblSeq_get_id_sequence (from Ensembl Sequence Tools)
EnsemblSeq_get_region_sequence (from Ensembl Sequence Tools)

EnsemblVEPTool (3 tools)¶

本地工具：

EnsemblVEP_annotate_hgvs (from Ensembl Vep Tools)
EnsemblVEP_annotate_rsid (from Ensembl Vep Tools)
EnsemblVEP_variant_recoder (from Ensembl Vep Tools)

EnsemblVariationExtTool (2 tools)¶

本地工具：

EnsemblVar_get_population_frequencies (from Ensembl Variation Ext Tools)
EnsemblVar_get_variant_consequences (from Ensembl Variation Ext Tools)

EnsemblXrefsTool (2 tools)¶

本地工具：

Ensembl_get_cross_references (from Ensembl Xrefs Tools)
Ensembl_lookup_gene_by_symbol (from Ensembl Xrefs Tools)

EpiGraphDBTool (7 tools)¶

本地工具：

EpiGraphDB_get_drugs_for_trait (from Epigraphdb Tools)
EpiGraphDB_get_gene_drug_associations (from Epigraphdb Tools)
EpiGraphDB_get_genetic_correlations (from Epigraphdb Tools)
EpiGraphDB_get_mendelian_randomization (from Epigraphdb Tools)
EpiGraphDB_map_gwas_to_efo (from Epigraphdb Tools)
EpiGraphDB_search_gene (from Epigraphdb Tools)
EpiGraphDB_search_opengwas (from Epigraphdb Tools)

EpidemiologyTool (5 tools)¶

本地工具：

Epidemiology_bayesian (from Epidemiology Tools)
Epidemiology_diagnostic (from Epidemiology Tools)
Epidemiology_nnt (from Epidemiology Tools)
Epidemiology_r0_herd (from Epidemiology Tools)
Epidemiology_vaccine_coverage (from Epidemiology Tools)

EpigenomicsTool (14 tools)¶

本地工具：

ENCODE_get_chromatin_state (from Epigenomics Tools)
ENCODE_search_annotations (from Epigenomics Tools)
ENCODE_search_chromatin_accessibility (from Epigenomics Tools)
ENCODE_search_hic_experiments (from Epigenomics Tools)
ENCODE_search_histone_experiments (from Epigenomics Tools)
ENCODE_search_methylation_experiments (from Epigenomics Tools)
ENCODE_search_microrna_experiments (from Epigenomics Tools)
ENCODE_search_rnaseq_experiments (from Epigenomics Tools)
EnsemblReg_get_regulatory_elements (from Epigenomics Tools)
GEO_get_dataset_details (from Epigenomics Tools)
GEO_search_atacseq_datasets (from Epigenomics Tools)
GEO_search_chipseq_datasets (from Epigenomics Tools)
GEO_search_methylation_datasets (from Epigenomics Tools)
GEO_search_rnaseq_datasets (from Epigenomics Tools)

EuHealthDeepDiveTool (1 tools)¶

本地工具：

euhealthinfo_deepdive (from Euhealth Tools)

EuHealthTopicSearchTool (20 tools)¶

本地工具：

euhealthinfo_search_alcohol_tobacco_psychoactive_use (from Euhealth Tools)
euhealthinfo_search_births (from Euhealth Tools)
euhealthinfo_search_cancer (from Euhealth Tools)
euhealthinfo_search_cancer_registry (from Euhealth Tools)
euhealthinfo_search_causes_of_death (from Euhealth Tools)
euhealthinfo_search_covid_19 (from Euhealth Tools)
euhealthinfo_search_deaths (from Euhealth Tools)
euhealthinfo_search_diabetes_epidemiology_registry (from Euhealth Tools)
euhealthinfo_search_disability (from Euhealth Tools)
euhealthinfo_search_healthcare_expenditure (from Euhealth Tools)
euhealthinfo_search_hospital_in_patient_data (from Euhealth Tools)
euhealthinfo_search_infectious_diseases (from Euhealth Tools)
euhealthinfo_search_key_indicators_registries_surveys (from Euhealth Tools)
euhealthinfo_search_mental_health (from Euhealth Tools)
euhealthinfo_search_obesity (from Euhealth Tools)
euhealthinfo_search_population_health_survey (from Euhealth Tools)
euhealthinfo_search_primary_care_workforce (from Euhealth Tools)
euhealthinfo_search_surveillance (from Euhealth Tools)
euhealthinfo_search_surveillance_mortality_rates (from Euhealth Tools)
euhealthinfo_search_vaccination (from Euhealth Tools)

EuroPMCAnnotationsTool (3 tools)¶

本地工具：

EuroPMCAnnot_get_annotations_by_type (from Europepmc Annotations Tools)
EuroPMCAnnot_get_article_annotations (from Europepmc Annotations Tools)
EuroPMCAnnot_get_chemicals_from_article (from Europepmc Annotations Tools)

EuropePMCFullTextFetchTool (1 tools)¶

本地工具：

EuropePMC_get_fulltext (from 欧洲 PMC 工具)

EuropePMCFullTextSnippetsTool (1 tools)¶

本地工具：

EuropePMC_get_fulltext_snippets (from 欧洲 PMC 工具)

EuropePMCGuidelinesTool (1 tools)¶

本地工具：

EuropePMC_Guidelines_Search（来源：统一指南工具）

EuropePMCRESTTool (2 tools)¶

本地工具：

EuropePMC_get_citations (from 欧洲 PMC 工具)
EuropePMC_get_references (from 欧洲 PMC 工具)

EuropePMCStructuredFullTextTool (1 tools)¶

本地工具：

EuropePMC_get_full_text (from 欧洲 PMC 工具)

EuropePMCTool（1 个工具）¶

本地工具：

EuropePMC_search_articles（来源：欧洲 PMC 工具）

ExecuteTool (1 tools)¶

本地工具：

execute_tool (from Compact Mode Tools)

ExpressionAtlasTool (4 tools)¶

本地工具：

ExpressionAtlas_get_baseline (from Expression Atlas Tools)
ExpressionAtlas_get_experiment (from Expression Atlas Tools)
ExpressionAtlas_search_differential (from Expression Atlas Tools)
ExpressionAtlas_search_experiments (from Expression Atlas Tools)

FAERSAnalyticsTool (6 tools)¶

本地工具：

FAERS_analyze_temporal_trends (from Faers Analytics Tools)
FAERS_calculate_disproportionality (from Faers Analytics Tools)
FAERS_compare_drugs (from Faers Analytics Tools)
FAERS_filter_serious_events (from Faers Analytics Tools)
FAERS_rollup_meddra_hierarchy (from Faers Analytics Tools)
FAERS_stratify_by_demographics (from Faers Analytics Tools)

FDACountAdditiveReactionsTool（6 个工具）¶

本地工具：

FAERS_count_additive_administration_routes（来源：FDA 药品不良事件工具）
FAERS_count_additive_adverse_reactions（来源：FDA 药品不良事件工具）
FAERS_count_additive_event_reports_by_country（来源：FDA 药品不良事件工具）
FAERS_count_additive_reaction_outcomes（来源：FDA 药品不良事件工具）
FAERS_count_additive_reports_by_reporter_country（来源：FDA 药品不良事件工具）
FAERS_count_additive_seriousness_classification（来源：FDA 药品不良事件工具）

FDADrugAdverseEventDetailTool (5 tools)¶

本地工具：

FAERS_search_adverse_event_reports (from Fda Drug Adverse Event Detail Tools)
FAERS_search_reports_by_drug_and_indication (from Fda Drug Adverse Event Detail Tools)
FAERS_search_reports_by_drug_and_outcome (from Fda Drug Adverse Event Detail Tools)
FAERS_search_reports_by_drug_and_reaction (from Fda Drug Adverse Event Detail Tools)
FAERS_search_serious_reports_by_drug (from Fda Drug Adverse Event Detail Tools)

FDADrugAdverseEventTool（9 个工具）¶

本地工具：

FAERS_count_country_by_drug_event（来源：FDA 药品不良事件工具）
FAERS_count_death_related_by_drug（来源：FDA 药品不良事件工具）
FAERS_count_drug_routes_by_event（来源：FDA 药品不良事件工具）
FAERS_count_drugs_by_drug_event（来源：FDA 药品不良事件工具）
FAERS_count_outcomes_by_drug_event（来源：FDA 药品不良事件工具）
FAERS_count_patient_age_distribution（来自 FDA 药品不良事件工具）
FAERS_count_reactions_by_drug_event（来源：FDA 药品不良事件工具）
FAERS_count_reportercountry_by_drug_event（来源：FDA 药品不良事件工具）
FAERS_count_seriousness_by_drug_event（来源：FDA 药品不良事件工具）

FDADrugInteractionDetailTool (1 tools)¶

本地工具：

FAERS_search_reports_by_drug_combination (from Fda Drug Adverse Event Detail Tools)

FDADrugLabel (152 tools)¶

本地工具：

FDA_get_DEA_schedule_info_by_drug_name (from FDA 药品标签工具)
FDA_get_abuse_dependence_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_abuse_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_accessories_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_active_ingredient_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_adverse_reactions_by_drug_name（来源：FDA 药品标签工具）
FDA_get_alarms_by_drug_name（来源：FDA 药品标签工具）
FDA_get_animal_pharmacology_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_assembly_installation_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_boxed_warning_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_brand_name_generic_name（来源：FDA 药品标签工具）
FDA_get_carcinogenic_mutagenic_fertility_by_drug_name（来源：FDA 药品标签工具）
FDA_get_child_safety_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_clinical_pharmacology_by_drug_name（来源：FDA 药品标签工具）
FDA_get_clinical_studies_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_conditions_info_for_doctor_consult_by_drug_name (from FDA 药品标签工具)
FDA_get_consulting_doctor_pharmacist_info_by_drug_name (from FDA 药品标签工具)
FDA_get_contact_for_questions_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_contraindications_by_drug_name（来源：FDA 药品标签工具）
FDA_get_dependence_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_dhcp_letter_info_by_drug_name (from FDA 药品标签工具)
FDA_get_disposal_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_do_not_use_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_document_id_by_drug_name（来源：FDA 药品标签工具）
FDA_get_dosage_and_storage_information_by_drug_name（来源：FDA 药品标签工具）
FDA_get_dosage_forms_and_strengths_by_drug_name（来源：FDA 药品标签工具）
FDA_get_drug_interactions_by_drug_name（来源：FDA 药品标签工具）
FDA_get_drug_name_by_SPL_ID（来源：FDA 药品标签工具）
FDA_get_drug_name_by_adverse_reaction（来源：FDA 药品标签工具）
FDA_get_drug_name_by_conditions_for_doctor_consult (from FDA 药品标签工具)
FDA_get_drug_name_by_dependence_info（来源：FDA 药品标签工具）
FDA_get_drug_name_by_document_id（来源：FDA 药品标签工具）
FDA_get_drug_name_by_dosage_info（来源：FDA 药品标签工具）
FDA_get_drug_name_by_environmental_warning（来自：FDA 药品标签工具）
FDA_get_drug_name_by_inactive_ingredient（来源：FDA 药品标签工具）
FDA_get_drug_name_by_labor_and_delivery_info（来源：FDA 药品标签工具）
FDA_get_drug_name_by_microbiology（来源：FDA 药品标签工具）
FDA_get_drug_name_by_other_safety_info（来源：FDA 药品标签工具）
FDA_get_drug_name_by_pharmacodynamics（来源：FDA 药品标签工具）
FDA_get_drug_name_by_pharmacogenomics（来自：FDA 药品标签工具）
FDA_get_drug_name_by_precautions（来源：FDA 药品标签工具）
FDA_get_drug_name_by_pregnancy_or_breastfeeding_info（来源：FDA 药品标签工具）
FDA_get_drug_name_by_principal_display_panel（来源：FDA 药品标签工具）
FDA_get_drug_name_by_reference（来源：FDA 药品标签工具）
FDA_get_drug_name_by_set_id（来源：FDA 药品标签工具）
FDA_get_drug_name_by_stop_use_info（来源：FDA 药品标签工具）
FDA_get_drug_name_by_storage_and_handling_info（来源：FDA 药品标签工具）
FDA_get_drug_name_by_warnings（来源：FDA 药品标签工具）
FDA_get_drug_name_from_patient_package_insert（来自：FDA 药品标签工具）
FDA_get_drug_names_by_abuse_dependence_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_abuse_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_accessories（来源：FDA 药品标签工具）
FDA_get_drug_names_by_active_ingredient（来源：FDA 药品标签工具）
FDA_get_drug_names_by_alarm（来源：FDA 药品标签工具）
FDA_get_drug_names_by_animal_pharmacology_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_application_number_NDC_number（来源：FDA 药品标签工具）
FDA_get_drug_names_by_assembly_installation_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_boxed_warning（来源：FDA 药品标签工具）
FDA_get_drug_names_by_child_safety_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_clinical_pharmacology（来源：FDA 药品标签工具）
FDA_get_drug_names_by_clinical_studies（来源：FDA 药品标签工具）
FDA_get_drug_names_by_consulting_doctor_pharmacist_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_contraindications（来源：FDA 药品标签工具）
FDA_get_drug_names_by_controlled_substance_DEA_schedule（来源：FDA 药品标签工具）
FDA_get_drug_names_by_dhcp_letter_info (from FDA 药品标签工具)
FDA_get_drug_names_by_disposal_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_dosage_forms_and_strengths_info（来自：FDA 药品标签工具）
FDA_get_drug_names_by_drug_interactions（来源：FDA 药品标签工具）
FDA_get_drug_names_by_effective_time（来源：FDA 药品标签工具）
FDA_get_drug_names_by_food_safety_warnings（来源：FDA 药品标签工具）
FDA_get_drug_names_by_general_precautions（来源：FDA 药品标签工具）
FDA_get_drug_names_by_geriatric_use（来源：FDA 药品标签工具）
FDA_get_drug_names_by_health_claim（来源：FDA 药品标签工具）
FDA_get_drug_names_by_indication（来自：FDA 药品标签工具）
FDA_get_drug_names_by_info_for_nursing_mothers（来源：FDA 药品标签工具）
FDA_get_drug_names_by_info_for_owner_or_caregiver (from FDA 药品标签工具)
FDA_get_drug_names_by_ingredient（来源：FDA 药品标签工具）
FDA_get_drug_names_by_instructions_for_use（来源：FDA 药品标签工具）
FDA_get_drug_names_by_lab_test_interference（来源：FDA 药品标签工具）
FDA_get_drug_names_by_lab_tests（来源：FDA 药品标签工具）
FDA_get_drug_names_by_mechanism_of_action（来源：FDA 药品标签工具）
FDA_get_drug_names_by_medication_guide（来源：FDA 药品标签工具）
FDA_get_drug_names_by_nonclinical_toxicology_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_nonteratogenic_effects（来源：FDA 药品标签工具）
FDA_get_drug_names_by_overdosage_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_pediatric_use（来源：FDA 药品标签工具）
FDA_get_drug_names_by_pharmacokinetics（来源：FDA 药品标签工具）
FDA_get_drug_names_by_population_use（来源：FDA 药品标签工具）
FDA_get_drug_names_by_pregnancy_effects_info（来源：FDA 药品标签工具）
FDA_get_drug_names_by_residue_warning（来源：FDA 药品标签工具）
FDA_get_drug_names_by_risk（来源：FDA 药品标签工具）
FDA_get_drug_names_by_route（来源：FDA 药品标签工具）
FDA_get_drug_names_by_safe_handling_warning（来源：FDA 药品标签工具）
FDA_get_drug_names_by_safety_summary（来源：FDA 药品标签工具）
FDA_get_drug_names_by_spl_indexing_data_elements（来源：FDA 药品标签工具）
FDA_get_drug_names_by_teratogenic_effects（来源：FDA 药品标签工具）
FDA_get_drug_names_by_user_safety_warning（来源：FDA 药品标签工具）
FDA_get_drug_names_by_warnings_and_cautions（来源：FDA 药品标签工具）
FDA_get_drugs_by_carcinogenic_mutagenic_fertility（来源：FDA 药品标签工具）
FDA_get_effective_time_by_drug_name（来源：FDA 药品标签工具）
FDA_get_environmental_warning_by_drug_name（来源：FDA 药品标签工具）
FDA_get_general_precautions_by_drug_name（来源：FDA 药品标签工具）
FDA_get_geriatric_use_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_health_claims_by_drug_name（来源：FDA 药品标签工具）
FDA_get_inactive_ingredient_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_indications_by_drug_name（来源：FDA 药品标签工具）
FDA_get_info_for_nursing_mothers_by_drug_name（来自：FDA 药品标签工具）
FDA_get_info_for_owner_caregiver_by_drug_name (from FDA 药品标签工具)
FDA_get_info_for_patients_by_drug_name（来源：FDA 药品标签工具）
FDA_get_ingredients_by_drug_name（来源：FDA 药品标签工具）
FDA_get_instructions_for_use_by_drug_name（来源：FDA 药品标签工具）
FDA_get_lab_test_interference_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_lab_tests_by_drug_name（来源：FDA 药品标签工具）
FDA_get_labor_and_delivery_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_manufacturer_name_NDC_number_by_drug_name（来源：FDA 药品标签工具）
FDA_get_mechanism_of_action_by_drug_name（来源：FDA 药品标签工具）
FDA_get_medication_guide_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_microbiology_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_nonclinical_toxicology_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_nonteratogenic_effects_by_drug_name（来源：FDA 药品标签工具）
FDA_get_other_safety_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_overdosage_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_patient_package_insert_from_drug_name（来源：FDA 药品标签工具）
FDA_get_pediatric_use_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_pharmacodynamics_by_drug_name（来自 FDA 药品标签工具）
FDA_get_pharmacogenomics_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_pharmacokinetics_by_drug_name（来源：FDA 药品标签工具）
FDA_get_population_use_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_precautions_by_drug_name（来源：FDA 药品标签工具）
FDA_get_pregnancy_effects_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_pregnancy_or_breastfeeding_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_principal_display_panel_by_drug_name（来源：FDA 药品标签工具）
FDA_get_purpose_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_recent_changes_by_drug_name（来源：FDA 药品标签工具）
FDA_get_reference_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_risk_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_route_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_safe_handling_warnings_by_drug_name（来源：FDA 药品标签工具）
FDA_get_safety_summary_by_drug_name（来源：FDA 药品标签工具）
FDA_get_spl_indexing_data_elements_by_drug_name（来源：FDA 药品标签工具）
FDA_get_spl_unclassified_section_by_drug_name（来源：FDA 药品标签工具）
FDA_get_stop_use_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_storage_and_handling_info_by_drug_name（来源：FDA 药品标签工具）
FDA_get_teratogenic_effects_by_drug_name（来源：FDA 药品标签工具）
FDA_get_user_safety_warning_by_drug_names（来源：FDA 药品标签工具）
FDA_get_warnings_and_cautions_by_drug_name（来源：FDA 药品标签工具）
FDA_get_warnings_by_drug_name（来自：FDA 药品标签工具）
FDA_get_when_using_info（来自：FDA 药品标签工具）
FDA_retrieve_device_use_by_drug_name（来源：FDA 药品标签工具）
FDA_retrieve_drug_name_by_device_use（来源：FDA 药品标签工具）
FDA_retrieve_drug_names_by_patient_medication_info（来源：FDA 药品标签工具）
FDA_retrieve_patient_medication_info_by_drug_name（来源：FDA 药品标签工具）

FDADrugLabelAggregated (1 tools)¶

本地工具：

FDA_get_drug_names_by_indication_aggregated (from FDA 药品标签工具)

FDADrugLabelFieldValueTool (1 tools)¶

本地工具：

FDA_get_drug_label_info_by_field_value (from FDA 药品标签工具)

FDADrugLabelGetDrugGenericNameTool（1 个工具）¶

本地工具：

FDA_get_drug_generic_name（来源：FDA 药品标签工具）

FDADrugLabelStats (1 tools)¶

本地工具：

FDA_get_drug_names_by_indication_stats (from FDA 药品标签工具)

FDAGSRSTool (3 tools)¶

本地工具：

FDAGSRS_get_structure (from Fda Gsrs Tools)
FDAGSRS_get_substance (from Fda Gsrs Tools)
FDAGSRS_search_substances (from Fda Gsrs Tools)

FDALabelTool (3 tools)¶

本地工具：

FDA_get_drug_label (from Openfda Label Tools)
FDA_list_drug_classes (from Openfda Label Tools)
FDA_search_drug_labels (from Openfda Label Tools)

FDAOrangeBookTool (6 tools)¶

本地工具：

FDA_OrangeBook_check_generic_availability (from Fda Orange Book Tools)
FDA_OrangeBook_get_approval_history (from Fda Orange Book Tools)
FDA_OrangeBook_get_exclusivity (from Fda Orange Book Tools)
FDA_OrangeBook_get_patent_info (from Fda Orange Book Tools)
FDA_OrangeBook_get_te_code (from Fda Orange Book Tools)
FDA_OrangeBook_search_drug (from Fda Orange Book Tools)

FDAPharmacogenomicBiomarkersTool (1 tools)¶

本地工具：

fda_pharmacogenomic_biomarkers (from Fda Pharmacogenomic Biomarkers Tools)

FatcatScholarTool (1 tools)¶

本地工具：

Fatcat_search_scholar（来自 Fatcat 工具）

FileDownloadTool (1 tools)¶

本地工具：

download_file (from File Download Tools)

FinnGenTool (4 tools)¶

本地工具：

FinnGen_get_phenotype (from Finngen Tools)
FinnGen_get_region_associations (from Finngen Tools)
FinnGen_get_variant_finemapping (from Finngen Tools)
FinnGen_list_phenotypes (from Finngen Tools)

FoldseekTool (2 tools)¶

本地工具：

Foldseek_get_result (from Foldseek Tools)
Foldseek_search_structure (from Foldseek Tools)

FoodDataCentralTool (2 tools)¶

本地工具：

FoodDataCentral_get_food (from Fooddata Central Tools)
FoodDataCentral_search_foods (from Fooddata Central Tools)

FourDNTool (4 tools)¶

本地工具：

FourDN_get_download_url (from Fourdn Tools)
FourDN_get_experiment_metadata (from Fourdn Tools)
FourDN_get_file_metadata (from Fourdn Tools)
FourDN_search_data (from Fourdn Tools)

GBIFOccurrenceTool (1 tools)¶

本地工具：

GBIF_search_occurrences (from Gbif Tools)

GBIFTool (1 tools)¶

本地工具：

GBIF_search_species (from Gbif Tools)

GDCCNVTool (1 tools)¶

本地工具：

GDC_get_cnv_data (from Gdc Tools)

GDCCasesTool (1 tools)¶

本地工具：

GDC_search_cases (from Gdc Tools)

GDCClinicalDataTool (1 tools)¶

本地工具：

GDC_get_clinical_data (from Gdc Tools)

GDCFilesTool (1 tools)¶

本地工具：

GDC_list_files (from Gdc Tools)

GDCGeneExpressionTool (1 tools)¶

本地工具：

GDC_get_gene_expression (from Gdc Tools)

GDCMutationFrequencyTool (1 tools)¶

本地工具：

GDC_get_mutation_frequency (from Gdc Tools)

GDCProjectsTool (1 tools)¶

本地工具：

GDC_list_projects (from Gdc Tools)

GDCSSMTool (1 tools)¶

本地工具：

GDC_get_ssm_by_gene (from Gdc Tools)

GDCSurvivalTool (1 tools)¶

本地工具：

GDC_get_survival (from Gdc Tools)

GEOGetDatasetInfo (1 tools)¶

本地工具：

geo_get_dataset_info (from 地理工具)

GEOGetSampleInfo (1 tools)¶

本地工具：

geo_get_sample_info (from 地理工具)

GEOSearchDatasets (1 tools)¶

本地工具：

geo_search_datasets (from 地理工具)

GINGuidelinesTool (1 tools)¶

本地工具：

GIN_Guidelines_Search (from 统一指南工具)

GNPSTool (2 tools)¶

本地工具：

GNPS_compare_spectra (from Gnps Tools)
GNPS_get_spectrum (from Gnps Tools)

GOAPITool (3 tools)¶

本地工具：

GOAPI_get_gene_functions (from Go Api Tools)
GOAPI_get_genes_by_function (from Go Api Tools)
GOAPI_get_term (from Go Api Tools)

GPCRdbTool (5 tools)¶

本地工具：

GPCRdb_get_ligands (from Gpcrdb Tools)
GPCRdb_get_mutations (from Gpcrdb Tools)
GPCRdb_get_protein (from Gpcrdb Tools)
GPCRdb_get_structures (from Gpcrdb Tools)
GPCRdb_list_proteins (from Gpcrdb Tools)

GProfilerTool (4 tools)¶

本地工具：

gProfiler_annotate_snps (from Gprofiler Tools)
gProfiler_convert_ids (from Gprofiler Tools)
gProfiler_enrichment (from Gprofiler Tools)
gProfiler_find_orthologs (from Gprofiler Tools)

GTDBTool (5 tools)¶

本地工具：

GTDB_get_genome (from Gtdb Tools)
GTDB_get_species (from Gtdb Tools)
GTDB_get_taxon_info (from Gtdb Tools)
GTDB_search_genomes (from Gtdb Tools)
GTDB_search_taxon (from Gtdb Tools)

GTExEQTLTool (1 tools)¶

本地工具：

GTEx_query_eqtl (from Gtex Tools)

GTExExpressionTool (1 tools)¶

本地工具：

GTEx_get_expression_summary (from Gtex Tools)

GTExV2Tool (10 tools)¶

本地工具：

GTEx_calculate_eqtl (from Gtex V2 Tools)
GTEx_get_dataset_info (from Gtex V2 Tools)
GTEx_get_eqtl_genes (from Gtex V2 Tools)
GTEx_get_gene_expression (from Gtex V2 Tools)
GTEx_get_median_gene_expression (from Gtex V2 Tools)
GTEx_get_multi_tissue_eqtls (from Gtex V2 Tools)
GTEx_get_sample_info (from Gtex V2 Tools)
GTEx_get_single_tissue_eqtls (from Gtex V2 Tools)
GTEx_get_tissue_sites (from Gtex V2 Tools)
GTEx_get_top_expressed_genes (from Gtex V2 Tools)

GWASAssociationByID（1 个工具）¶

本地工具：

gwas_get_association_by_id（来源：Gwas 工具）

GWASAssociationSearch（1 个工具）¶

本地工具：

gwas_search_associations（来自 Gwas 工具）

GWASAssociationsForSNP（1 个工具）¶

本地工具：

gwas_get_associations_for_snp（来自 Gwas 工具）

GWASAssociationsForStudy（1 个工具）¶

本地工具：

gwas_get_associations_for_study（来自 Gwas 工具）

GWASAssociationsForTrait（1个工具）¶

本地工具：

gwas_get_associations_for_trait（来自 Gwas 工具）

GWASGeneSearch (1 tools)¶

本地工具：

GWAS_search_associations_by_gene (from Gwas 工具)

GWASSNPByID（1 个工具）¶

本地工具：

gwas_get_snp_by_id（来自 Gwas 工具）

GWASSNPSearch（1 个工具）¶

本地工具：

gwas_search_snps（来自 Gwas 工具）

GWASSNPsForGene（1个工具）¶

本地工具：

gwas_get_snps_for_gene（来自 Gwas 工具）

GWASStudiesForTrait（1 个工具）¶

本地工具：

gwas_get_studies_for_trait（来源：Gwas 工具）

GWASStudyByID（1 个工具）¶

本地工具：

gwas_get_study_by_id（来源：Gwas 工具）

GWASStudySearch（1 个工具）¶

本地工具：

gwas_search_studies（来源：Gwas 工具）

GWASSumStatsTool (3 tools)¶

本地工具：

GWASSumStats_get_region_associations (from Gwas Sumstats Tools)
GWASSumStats_get_trait_studies (from Gwas Sumstats Tools)
GWASSumStats_list_studies (from Gwas Sumstats Tools)

GWASVariantsForTrait（1 个工具）¶

本地工具：

gwas_get_variants_for_trait（来自 Gwas 工具）

GenCCTool (3 tools)¶

本地工具：

GenCC_get_classifications (from Gencc Tools)
GenCC_search_disease (from Gencc Tools)
GenCC_search_gene (from Gencc Tools)

GeneOntologyTool（5 个工具）¶

本地工具：

GO_get_annotations_for_gene（来自基因本体工具）
GO_get_genes_for_term（来自基因本体工具）
GO_get_term_by_id（来源：基因本体工具）
GO_get_term_details（来自基因本体工具）
GO_search_terms（来自基因本体工具）

GenomeNexusTool (4 tools)¶

本地工具：

GenomeNexus_annotate_mutation (from Genome Nexus Tools)
GenomeNexus_annotate_variant (from Genome Nexus Tools)
GenomeNexus_get_cancer_hotspots (from Genome Nexus Tools)
GenomeNexus_get_canonical_transcript (from Genome Nexus Tools)

GetSPLBySetIDTool（1 个工具）¶

本地工具：

DailyMed_get_spl_by_setid（来源：Dailymed 工具）

GetToolInfo (1 tools)¶

本地工具：

get_tool_info (from Compact Mode Tools)

GlyGenTool (5 tools)¶

本地工具：

GlyGen_get_glycan (from Glygen Tools)
GlyGen_get_glycoprotein (from Glygen Tools)
GlyGen_get_site (from Glygen Tools)
GlyGen_search_glycans (from Glygen Tools)
GlyGen_search_glycoproteins (from Glygen Tools)

GmrepoTool (2 tools)¶

本地工具：

GMrepo_get_phenotypes (from Gmrepo Tools)
GMrepo_search_species (from Gmrepo Tools)

GrepTools (1 tools)¶

本地工具：

grep_tools (from Compact Mode Tools)

GtoPdbRESTTool (3 tools)¶

本地工具：

GtoPdb_get_interactions (from Gtopdb Tools)
GtoPdb_search_ligands (from Gtopdb Tools)
GtoPdb_search_targets (from Gtopdb Tools)

GxATool (3 tools)¶

本地工具：

GxA_get_experiment_expression (from Gxa Tools)
GxA_get_experiment_info (from Gxa Tools)
GxA_list_experiments (from Gxa Tools)

HALTool（1 个工具）¶

本地工具：

HAL_search_archive（来源：Hal 工具）

HCATool (2 tools)¶

本地工具：

hca_get_file_manifest (from Hca Tools)
hca_search_projects (from Hca Tools)

HGNCTool (4 tools)¶

本地工具：

HGNC_fetch_gene_by_id (from Hgnc Tools)
HGNC_fetch_gene_by_symbol (from Hgnc Tools)
HGNC_search_by_location (from Hgnc Tools)
HGNC_search_genes (from Hgnc Tools)

HMDBTool (6 tools)¶

本地工具：

HMDB_get_diseases (from Hmdb Rest)
HMDB_get_diseases (from Hmdb Tools)
HMDB_get_metabolite (from Hmdb Rest)
HMDB_get_metabolite (from Hmdb Tools)
HMDB_search (from Hmdb Rest)
HMDB_search (from Hmdb Tools)

HPAGetBiologicalProcessTool（1 个工具）¶

本地工具：

HPA_get_biological_processes_by_gene（来自 Hpa 工具）

HPAGetCancerPrognosticsTool（1 个工具）¶

本地工具：

HPA_get_cancer_prognostics_by_gene（来自 Hpa 工具）

HPAGetComparativeExpressionTool（1 个工具）¶

本地工具：

HPA_get_comparative_expression_by_gene_and_cellline（来自 Hpa 工具）

HPAGetContextualBiologicalProcessTool（1 个工具）¶

本地工具：

HPA_get_contextual_biological_process_analysis（来自 Hpa 工具）

HPAGetDiseaseExpressionTool（1 个工具）¶

本地工具：

HPA_get_disease_expression_by_gene_tissue_disease（来自 Hpa 工具）

HPAGetGeneJSONTool（1 个工具）¶

本地工具：

HPA_get_gene_basic_info_by_ensembl_id（来自 Hpa 工具）

HPAGetGenePageDetailsTool（1 个工具）¶

本地工具：

HPA_get_comprehensive_gene_details_by_ensembl_id（来自 Hpa 工具）

HPAGetGeneXMLTool（1 个工具）¶

本地工具：

HPA_get_gene_tsv_data_by_ensembl_id（来自 Hpa 工具）

HPAGetProteinInteractionsTool（1 个工具）¶

本地工具：

HPA_get_protein_interactions_by_gene（来自 Hpa 工具）

HPAGetRnaExpressionBySourceTool（1 个工具）¶

本地工具：

HPA_get_rna_expression_by_source（来源于 Hpa 工具）

HPAGetRnaExpressionByTissueTool（1 个工具）¶

本地工具：

HPA_get_rna_expression_in_specific_tissues（来源：Hpa 工具）

HPAGetSubcellularLocationTool（1 个工具）¶

本地工具：

HPA_get_subcellular_location（来自 Hpa 工具）

HPASearchGenesTool（1 个工具）¶

本地工具：

HPA_search_genes_by_query（来源：Hpa 工具）

HPASearchTool (1 tools)¶

本地工具：

HPA_generic_search (from Hpa 工具)

HPOTool (3 tools)¶

本地工具：

HPO_get_term (from Hpo Tools)
HPO_get_term_hierarchy (from Hpo Tools)
HPO_search_terms (from Hpo Tools)

HarmonizomeTool (5 tools)¶

本地工具：

Harmonizome_get_dataset (from Harmonizome Tools)
Harmonizome_get_gene (from Harmonizome Tools)
Harmonizome_list_datasets (from Harmonizome Tools)
Harmonizome_search (from Harmonizome Tools)
Harmonizome_search_genes (from Harmonizome Tools)

HealthDisparitiesTool (2 tools)¶

本地工具：

health_disparities_get_county_rankings_info (from Health Disparities Tools)
health_disparities_get_svi_info (from Health Disparities Tools)

HocomocoTool (2 tools)¶

本地工具：

HOCOMOCO_get_motif (from Hocomoco Tools)
HOCOMOCO_search_motifs (from Hocomoco Tools)

HuBMAPTool (3 tools)¶

本地工具：

HuBMAP_get_dataset (from Hubmap Tools)
HuBMAP_list_organs (from Hubmap Tools)
HuBMAP_search_datasets (from Hubmap Tools)

HumanBaseTool（1 个工具）¶

本地工具：

humanbase_ppi_analysis（来自：Humanbase 工具）

ICD10Tool (2 tools)¶

本地工具：

ICD10_get_code_info (from Icd Tools)
ICD10_search_codes (from Icd Tools)

ICDTool (3 tools)¶

本地工具：

ICD11_browse_hierarchy (from Icd Tools)
ICD11_get_entity (from Icd Tools)
ICD11_search_diseases (from Icd Tools)

ICiteSearchPublicationsTool (1 tools)¶

本地工具：

iCite_search_publications (from Icite Tools)

IDTTool (2 tools)¶

本地工具：

IDT_analyze_oligo (from Idt Tools)
IDT_check_self_dimer (from Idt Tools)

IEDBPredictionTool (2 tools)¶

本地工具：

IEDB_predict_mhci_binding (from Iedb Prediction Tools)
IEDB_predict_mhcii_binding (from Iedb Prediction Tools)

IEDBTool (12 tools)¶

本地工具：

iedb_get_epitope_antigens (from Iedb Tools)
iedb_get_epitope_mhc (from Iedb Tools)
iedb_get_epitope_references (from Iedb Tools)
iedb_get_epitope_tcell_assays (from Iedb Ext Tools)
iedb_search_antigens (from Iedb Tools)
iedb_search_bcell (from Iedb Tools)
iedb_search_bcr_sequences (from Iedb Ext Tools)
iedb_search_epitopes (from Iedb Tools)
iedb_search_mhc (from Iedb Tools)
iedb_search_references (from Iedb Tools)
iedb_search_tcell_assays (from Iedb Ext Tools)
iedb_search_tcr_sequences (from Iedb Ext Tools)

IGSRTool (3 tools)¶

本地工具：

IGSR_list_data_collections (from Igsr Tools)
IGSR_search_populations (from Igsr Tools)
IGSR_search_samples (from Igsr Tools)

IMGTTool (3 tools)¶

本地工具：

IMGT_get_gene_info (from Imgt Tools)
IMGT_get_sequence (from Imgt Tools)
IMGT_search_genes (from Imgt Tools)

IMPCTool (4 tools)¶

本地工具：

IMPC_get_gene_phenotype_hits (from Impc Tools)
IMPC_get_gene_summary (from Impc Tools)
IMPC_get_phenotypes_by_gene (from Impc Tools)
IMPC_search_genes (from Impc Tools)

INDRADBTool (3 tools)¶

本地工具：

INDRA_get_evidence_count (from Indra Tools)
INDRA_get_statement_by_hash (from Indra Tools)
INDRA_get_statements (from Indra Tools)

INaturalistTool (4 tools)¶

本地工具：

iNaturalist_get_species_counts (from Inaturalist Tools)
iNaturalist_get_taxon (from Inaturalist Tools)
iNaturalist_search_observations (from Inaturalist Tools)
iNaturalist_search_taxa (from Inaturalist Tools)

ITISTool (4 tools)¶

本地工具：

ITIS_get_full_record (from Itis Tools)
ITIS_get_hierarchy (from Itis Tools)
ITIS_search_by_common_name (from Itis Tools)
ITIS_search_by_scientific_name (from Itis Tools)

ImmPortTool (1 tools)¶

本地工具：

ImmPort_search_studies (from Immport Tools)

IntActRESTTool (8 tools)¶

本地工具：

intact_get_complex_details (from Intact Tools)
intact_get_interaction_details (from Intact Tools)
intact_get_interaction_network (from Intact Tools)
intact_get_interactions (from Intact Tools)
intact_get_interactions_by_complex (from Intact Tools)
intact_get_interactions_by_organism (from Intact Tools)
intact_get_interactor (from Intact Tools)
intact_search_interactions (from Intact Tools)

IntOGenTool (4 tools)¶

本地工具：

IntOGen_get_drivers (from Intogen Tools)
IntOGen_get_gene_info (from Intogen Tools)
IntOGen_list_cancer_types (from Intogen Tools)
IntOGen_list_cohorts (from Intogen Tools)

InterProDomainArchTool (3 tools)¶

本地工具：

InterPro_get_clan_members (from Interpro Domain Arch Tools)
InterPro_get_protein_domain_architecture (from Interpro Domain Arch Tools)
InterPro_get_structures_for_domain (from Interpro Domain Arch Tools)

InterProEntryTool (2 tools)¶

本地工具：

InterPro_get_entries_for_protein (from Interpro Entry Tools)
InterPro_search_entries (from Interpro Entry Tools)

InterProExtTool (1 tools)¶

本地工具：

InterPro_get_proteins_by_domain (from Interpro Ext Tools)

InterProRESTTool (3 tools)¶

本地工具：

InterPro_get_domain_details (from Interpro Tools)
InterPro_get_protein_domains (from Interpro Tools)
InterPro_search_domains (from Interpro Tools)

InterProScanTool (3 tools)¶

本地工具：

InterProScan_get_job_results (from Interproscan Tools)
InterProScan_get_job_status (from Interproscan Tools)
InterProScan_scan_sequence (from Interproscan Tools)

InterVarTool (1 tools)¶

本地工具：

InterVar_classify_variant (from Intervar Tools)

JASPARRESTTool (8 tools)¶

本地工具：

JASPAR_get_transcription_factors (from Jaspar Tools)
jaspar_get_matrix (from Jaspar Tools)
jaspar_get_matrix_versions (from Jaspar Tools)
jaspar_list_collections (from Jaspar Tools)
jaspar_list_releases (from Jaspar Tools)
jaspar_list_species (from Jaspar Tools)
jaspar_list_taxa (from Jaspar Tools)
jaspar_search_matrices (from Jaspar Tools)

KEGGExtTool (17 tools)¶

本地工具：

KEGG_convert_ids (from Kegg Conv Link Tools)
KEGG_get_brite_hierarchy (from Kegg Brite Tools)
KEGG_get_compound (from Kegg Ext Tools)
KEGG_get_disease (from Kegg Disease Drug Tools)
KEGG_get_disease_genes (from Kegg Disease Drug Tools)
KEGG_get_drug (from Kegg Disease Drug Tools)
KEGG_get_drug_targets (from Kegg Disease Drug Tools)
KEGG_get_gene_pathways (from Kegg Ext Tools)
KEGG_get_network (from Kegg Network Variant Tools)
KEGG_get_pathway_genes (from Kegg Ext Tools)
KEGG_get_variant (from Kegg Network Variant Tools)
KEGG_link_entries (from Kegg Conv Link Tools)
KEGG_list_brite_hierarchies (from Kegg Brite Tools)
KEGG_search_disease (from Kegg Disease Drug Tools)
KEGG_search_drug (from Kegg Disease Drug Tools)
KEGG_search_network (from Kegg Network Variant Tools)
KEGG_search_variant (from Kegg Network Variant Tools)

KEGGFindGenes (1 tools)¶

本地工具：

kegg_find_genes (from Kegg Tools)

KEGGGetGeneInfo (1 tools)¶

本地工具：

kegg_get_gene_info (from Kegg Tools)

KEGGGetPathwayInfo (1 tools)¶

本地工具：

kegg_get_pathway_info (from Kegg Tools)

KEGGListOrganisms (1 tools)¶

本地工具：

kegg_list_organisms (from Kegg Tools)

KEGGSearchPathway (1 tools)¶

本地工具：

kegg_search_pathway (from Kegg Tools)

L1000FWDTool (1 tools)¶

本地工具：

L1000FWD_sig_search (from L1000Fwd Tools)

LINCSSignatureTool (2 tools)¶

本地工具：

LINCS_list_libraries (from Lincs Tools)
LINCS_search_signatures (from Lincs Tools)

LOINCTool (4 tools)¶

本地工具：

LOINC_get_answer_list (from Loinc Tools)
LOINC_get_code_details (from Loinc Tools)
LOINC_search_forms (from Loinc Tools)
LOINC_search_tests (from Loinc Tools)

LOVDTool (3 tools)¶

本地工具：

LOVD_get_gene (from Lovd Tools)
LOVD_get_variants (from Lovd Tools)
LOVD_search_variants (from Lovd Tools)

LipidMapsTool (3 tools)¶

本地工具：

LipidMaps_get_compound_by_id (from Lipidmaps Tools)
LipidMaps_search_by_formula (from Lipidmaps Tools)
LipidMaps_search_by_name (from Lipidmaps Tools)

ListTools (1 tools)¶

本地工具：

list_tools (from Compact Mode Tools)

MCPAutoLoaderTool（5 个工具）¶

本地工具：

mcp_auto_loader_boltz (from Boltz Mcp Loader Tools)
mcp_auto_loader_esm (from Mcp Auto Loader Esm)
mcp_auto_loader_expert_feedback（来自：专家反馈工具）
mcp_auto_loader_txagent（来源：Txagent 客户端工具）
mcp_auto_loader_uspto_downloader（来源：USPTO 下载工具）

MEMETool (4 tools)¶

本地工具：

MEME_discover_motifs (from Meme Tools)
MEME_fimo_scan (from Meme Tools)
MEME_list_databases (from Meme Tools)
MEME_tomtom_compare (from Meme Tools)

MGnifyAnalysesTool (1 tools)¶

本地工具：

MGnify_list_analyses (from Mgnify Tools)

MGnifyExpandedTool (7 tools)¶

本地工具：

MGnify_get_genome (from Mgnify Expanded Tools)
MGnify_get_go_terms (from Mgnify Expanded Tools)
MGnify_get_interpro (from Mgnify Expanded Tools)
MGnify_get_study_detail (from Mgnify Expanded Tools)
MGnify_get_taxonomy (from Mgnify Expanded Tools)
MGnify_list_biomes (from Mgnify Expanded Tools)
MGnify_search_genomes (from Mgnify Expanded Tools)

MGnifyStudiesTool (1 tools)¶

本地工具：

MGnify_search_studies (from Mgnify Tools)

MODOMICSTool (3 tools)¶

本地工具：

MODOMICS_get_modification (from Modomics Tools)
MODOMICS_list_modifications (from Modomics Tools)
MODOMICS_search_modifications (from Modomics Tools)

MPDRESTTool (1 tools)¶

本地工具：

MPD_get_phenotype_data (from Mpd Tools)

MarkItDownTool (1 tools)¶

本地工具：

convert_to_markdown (from Markitdown 工具)

MassIVETool (2 tools)¶

本地工具：

MassIVE_get_dataset (from Massive Tools)
MassIVE_search_datasets (from Massive Tools)

MaveDBTool (4 tools)¶

本地工具：

MaveDB_get_score_set (from Mavedb Tools)
MaveDB_get_variant_scores (from Mavedb Tools)
MaveDB_search_experiments (from Mavedb Tools)
MaveDB_search_score_sets (from Mavedb Tools)

MculeTool (4 tools)¶

本地工具：

Mcule_get_compound (from Mcule Tools)
Mcule_get_database (from Mcule Tools)
Mcule_list_databases (from Mcule Tools)
Mcule_lookup_compound (from Mcule Tools)

MeSHTool (3 tools)¶

本地工具：

MeSH_get_descriptor (from Mesh Tools)
MeSH_search_descriptors (from Mesh Tools)
MeSH_search_terms (from Mesh Tools)

MedGenTool (3 tools)¶

本地工具：

MedGen_get_clinical_features (from Medgen Tools)
MedGen_get_condition (from Medgen Tools)
MedGen_search_conditions (from Medgen Tools)

MedlinePlusRESTTool（5个工具）¶

本地工具：

MedlinePlus_connect_lookup_by_code（来自：Medlineplus 工具）
MedlinePlus_get_genetics_condition_by_name（来自：Medlineplus 工具）
MedlinePlus_get_genetics_gene_by_name（来源：Medlineplus 工具）
MedlinePlus_get_genetics_index（来源：Medlineplus 工具）
MedlinePlus_按关键词搜索主题（来源：Medlineplus 工具）

MetaAnalysisTool (1 tools)¶

本地工具：

MetaAnalysis_run (from Meta Analysis Tools)

MetaCycTool (4 tools)¶

本地工具：

MetaCyc_get_compound (from Metacyc Tools)
MetaCyc_get_pathway (from Metacyc Tools)
MetaCyc_get_reaction (from Metacyc Tools)
MetaCyc_search_pathways (from Metacyc Tools)

MetaboAnalystTool (4 tools)¶

本地工具：

MetaboAnalyst_biomarker_enrichment (from Metaboanalyst Tools)
MetaboAnalyst_get_pathway_library (from Metaboanalyst Tools)
MetaboAnalyst_name_to_id (from Metaboanalyst Tools)
MetaboAnalyst_pathway_enrichment (from Metaboanalyst Tools)

MetaboLightsRESTTool (9 tools)¶

本地工具：

metabolights_get_study (from Metabolights Tools)
metabolights_get_study_assays (from Metabolights Tools)
metabolights_get_study_data_files (from Metabolights Tools)
metabolights_get_study_factors (from Metabolights Tools)
metabolights_get_study_files (from Metabolights Tools)
metabolights_get_study_protocols (from Metabolights Tools)
metabolights_get_study_samples (from Metabolights Tools)
metabolights_list_studies (from Metabolights Tools)
metabolights_search_studies (from Metabolights Tools)

MetaboliteTool (6 tools)¶

本地工具：

HMDB_get_diseases (from Metabolite Tools)
HMDB_get_metabolite (from Metabolite Tools)
HMDB_search (from Metabolite Tools)
Metabolite_get_diseases (from Metabolite Tools)
Metabolite_get_info (from Metabolite Tools)
Metabolite_search (from Metabolite Tools)

MetabolomicsWorkbenchTool (6 tools)¶

本地工具：

MetabolomicsWorkbench_get_compound_by_pubchem_cid (from Metabolomics Workbench Tools)
MetabolomicsWorkbench_get_refmet_info (from Metabolomics Workbench Tools)
MetabolomicsWorkbench_get_study (from Metabolomics Workbench Tools)
MetabolomicsWorkbench_search_by_exact_mass (from Metabolomics Workbench Tools)
MetabolomicsWorkbench_search_by_mz (from Metabolomics Workbench Tools)
MetabolomicsWorkbench_search_compound_by_name (from Metabolomics Workbench Tools)

MobiDBTool (2 tools)¶

本地工具：

MobiDB_get_consensus (from Mobidb Tools)
MobiDB_get_protein (from Mobidb Tools)

Molecule2DTool (1 tools)¶

本地工具：

visualize_molecule_2d (from 分子二维工具)

Molecule3DTool (1 tools)¶

本地工具：

visualize_molecule_3d (from 分子3D工具)

Monarch (5 tools)¶

本地工具：

Monarch_get_gene_diseases (from Monarch 工具)
Monarch_get_gene_phenotypes (from Monarch 工具)
Monarch_search_gene (from Monarch 工具)
get_HPO_ID_by_phenotype（来自 Monarch 工具）
get_phenotype_by_HPO_ID（来自 Monarch 工具）

MonarchDiseasesForMultiplePheno（1 个工具）¶

本地工具：

get_joint_associated_diseases_by_HPO_ID_list（来自 Monarch 工具）

MonarchV3Tool (12 tools)¶

本地工具：

MonarchV3_get_associations (from Monarch V3 Tools)
MonarchV3_get_entity (from Monarch V3 Tools)
MonarchV3_get_histopheno (from Monarch V3 Tools)
MonarchV3_get_mappings (from Monarch V3 Tools)
MonarchV3_phenotype_similarity_search (from Monarch V3 Tools)
MonarchV3_search (from Monarch V3 Tools)
Monarch_get_associations (from Monarch New Tools)
Monarch_get_entity (from Monarch New Tools)
Monarch_search (from Monarch New Tools)
Mondo_get_disease (from Mondo Tools)
Mondo_get_disease_phenotypes (from Mondo Tools)
Mondo_search_disease (from Mondo Tools)

MutalyzerTool (3 tools)¶

本地工具：

Mutalyzer_back_translate (from Mutalyzer Tools)
Mutalyzer_normalize_variant (from Mutalyzer Tools)
Mutalyzer_parse_hgvs (from Mutalyzer Tools)

MyChemTool (2 tools)¶

本地工具：

MyChem_get_chemical_annotation (from Biothings Tools)
MyChem_query_chemicals (from Biothings Tools)

MyDiseaseTool (2 tools)¶

本地工具：

MyDisease_get_disease (from Mydisease Tools)
MyDisease_search_diseases (from Mydisease Tools)

MyGeneTool (3 tools)¶

本地工具：

MyGene_batch_query (from Biothings Tools)
MyGene_get_gene_annotation (from Biothings Tools)
MyGene_query_genes (from Biothings Tools)

MyVariantTool (3 tools)¶

本地工具：

MyVariant_get_pathogenicity_scores (from Biothings Tools)
MyVariant_get_variant_annotation (from Biothings Tools)
MyVariant_query_variants (from Biothings Tools)

NCATool (3 tools)¶

本地工具：

NCA_calculate_bioavailability (from Nca Tools)
NCA_compute_parameters (from Nca Tools)
NCA_fit_one_compartment (from Nca Tools)

NCBIBlastTool (2 tools)¶

本地工具：

BLAST_nucleotide_search (from Blast Tools)
BLAST_protein_search (from Blast Tools)

NCBIDatasetsTool (5 tools)¶

本地工具：

NCBIDatasets_get_gene (from Ncbi Datasets Tools)
NCBIDatasets_get_gene_by_symbol (from Ncbi Datasets Tools)
NCBIDatasets_get_orthologs (from Ncbi Datasets Tools)
NCBIDatasets_get_taxonomy (from Ncbi Datasets Tools)
NCBIDatasets_suggest_taxonomy (from Ncbi Datasets Tools)

NCBINucleotideSearchTool (3 tools)¶

本地工具：

NCBI_fetch_accessions (from Ncbi Nucleotide Tools)
NCBI_get_sequence (from Ncbi Nucleotide Tools)
NCBI_search_nucleotide (from Ncbi Nucleotide Tools)

NCBISRATool (4 tools)¶

本地工具：

NCBI_SRA_get_download_urls (from Ncbi Sra Tools)
NCBI_SRA_get_run_info (from Ncbi Sra Tools)
NCBI_SRA_link_to_biosample (from Ncbi Sra Tools)
NCBI_SRA_search_runs (from Ncbi Sra Tools)

NCBIVariationTool (5 tools)¶

本地工具：

NCBIVariation_hgvs_to_spdi (from Ncbi Variation Tools)
NCBIVariation_rsid_lookup (from Ncbi Variation Tools)
NCBIVariation_spdi_canonical (from Ncbi Variation Tools)
NCBIVariation_spdi_equivalents (from Ncbi Variation Tools)
NCBIVariation_spdi_to_hgvs (from Ncbi Variation Tools)

NCCNGuidelineTool (3 tools)¶

本地工具：

NCCN_get_patient_guideline (from Ada Aha Nccn Tools)
NCCN_list_patient_guidelines (from Ada Aha Nccn Tools)
NCCN_search_guidelines (from Ada Aha Nccn Tools)

NCICACTUSTool (1 tools)¶

本地工具：

NCICACTUS_resolve (from Nci Cactus Tools)

NCIThesaurusTool (3 tools)¶

本地工具：

NCIThesaurus_get_children (from Nci Thesaurus Tools)
NCIThesaurus_get_concept (from Nci Thesaurus Tools)
NCIThesaurus_search (from Nci Thesaurus Tools)

NDExTool (3 tools)¶

本地工具：

NDEx_get_network (from Ndex Tools)
NDEx_get_network_summary (from Ndex Tools)
NDEx_search_networks (from Ndex Tools)

NEBTmTool (2 tools)¶

本地工具：

NEB_Tm_calculate (from Neb Tm Tools)
NEB_Tm_list_polymerases (from Neb Tm Tools)

NHANESTool (3 tools)¶

本地工具：

NHANES_download_and_parse (from Nhanes Tools)
nhanes_get_dataset_info (from Nhanes Tools)
nhanes_search_datasets (from Nhanes Tools)

NICEGuidelineFullTextTool (1 tools)¶

本地工具：

NICE_Guideline_Full_Text（来源：统一指南工具）

NICEWebScrapingTool (1 tools)¶

本地工具：

NICE_临床指南_搜索（来源：统一指南工具）

NeuroMorphoTool (4 tools)¶

本地工具：

NeuroMorpho_get_field_values (from Neuromorpho Tools)
NeuroMorpho_get_morphometry (from Neuromorpho Tools)
NeuroMorpho_get_neuron (from Neuromorpho Tools)
NeuroMorpho_search_neurons (from Neuromorpho Tools)

NextstrainTool (2 tools)¶

本地工具：

Nextstrain_get_dataset (from Nextstrain Tools)
Nextstrain_list_datasets (from Nextstrain Tools)

NvidiaNIMTool (16 tools)¶

本地工具：

NvidiaNIM_alphafold2 (from Nvidia Nim Tools)
NvidiaNIM_alphafold2_multimer (from Nvidia Nim Tools)
NvidiaNIM_boltz2 (from Nvidia Nim Tools)
NvidiaNIM_diffdock (from Nvidia Nim Tools)
NvidiaNIM_esm2_650m (from Nvidia Nim Tools)
NvidiaNIM_esmfold (from Nvidia Nim Tools)
NvidiaNIM_evo2 (from Nvidia Nim Tools)
NvidiaNIM_genmol (from Nvidia Nim Tools)
NvidiaNIM_maisi (from Nvidia Nim Tools)
NvidiaNIM_molmim (from Nvidia Nim Tools)
NvidiaNIM_msa_search (from Nvidia Nim Tools)
NvidiaNIM_openfold2 (from Nvidia Nim Tools)
NvidiaNIM_openfold3 (from Nvidia Nim Tools)
NvidiaNIM_proteinmpnn (from Nvidia Nim Tools)
NvidiaNIM_rfdiffusion (from Nvidia Nim Tools)
NvidiaNIM_vista3d (from Nvidia Nim Tools)

OBISOccurrenceTool (1 tools)¶

本地工具：

OBIS_search_occurrences (from Obis Tools)

OBISTaxaTool (1 tools)¶

本地工具：

OBIS_search_taxa (from Obis Tools)

ODPHPItemList（1 个工具）¶

本地工具：

odphp_itemlist（来源：Odphp 工具）

ODPHPMyHealthfinder（1 个工具）¶

本地工具：

odphp_myhealthfinder（来自 Odphp 工具）

ODPHPOutlinkFetch（1 个工具）¶

本地工具：

odphp_outlink_fetch（来自 Odphp 工具）

ODPHPTopicSearch（1 个工具）¶

本地工具：

odphp_topicsearch（来自 Odphp 工具）

OLSRESTTool (5 tools)¶

本地工具：

ols_get_efo_ontology_info (from Efo 工具)
ols_get_efo_term (from Efo 工具)
ols_get_efo_term_children (from Efo 工具)
ols_list_ontologies (from Efo 工具)
ols_search_efo_terms (from Efo 工具)

OLSTool (7 tools)¶

本地工具：

ols_find_similar_terms (from Ols Tools)
ols_get_ontology_info (from Ols Tools)
ols_get_term_ancestors (from Ols Tools)
ols_get_term_children (from Ols Tools)
ols_get_term_info (from Ols Tools)
ols_search_ontologies (from Ols Tools)
ols_search_terms (from Ols Tools)

OMATool (4 tools)¶

本地工具：

OMA_get_group (from Oma Tools)
OMA_get_hog (from Oma Tools)
OMA_get_orthologs (from Oma Tools)
OMA_get_protein (from Oma Tools)

OMIMTool (4 tools)¶

本地工具：

OMIM_get_clinical_synopsis (from Omim Tools)
OMIM_get_entry (from Omim Tools)
OMIM_get_gene_map (from Omim Tools)
OMIM_search (from Omim Tools)

ORCIDTool (4 tools)¶

本地工具：

ORCID_get_employments (from Orcid Tools)
ORCID_get_profile (from Orcid Tools)
ORCID_get_works (from Orcid Tools)
ORCID_search_researchers (from Orcid Tools)

OSFPreprintsTool（1 个工具）¶

本地工具：

OSF_search_preprints（来自：Osf 预印本工具）

OmniPathTool (8 tools)¶

本地工具：

OmniPath_get_cell_communication_annotations (from Omnipath Tools)
OmniPath_get_complexes (from Omnipath Tools)
OmniPath_get_dorothea_regulon (from Omnipath Tools)
OmniPath_get_enzyme_substrate (from Omnipath Tools)
OmniPath_get_intercell_roles (from Omnipath Tools)
OmniPath_get_ligand_receptor_interactions (from Omnipath Tools)
OmniPath_get_signaling_interactions (from Omnipath Tools)
OmniPath_get_tf_target_interactions (from Omnipath Tools)

OncoKBTool (6 tools)¶

本地工具：

OncoKB_annotate_copy_number (from Oncokb Tools)
OncoKB_annotate_mutations (from Oncokb Tools)
OncoKB_annotate_variant (from Oncokb Tools)
OncoKB_get_cancer_genes (from Oncokb Tools)
OncoKB_get_gene_info (from Oncokb Tools)
OncoKB_get_levels (from Oncokb Tools)

OncoTreeGetTypeTool (1 tools)¶

本地工具：

OncoTree_get_type (from Oncotree Tools)

OncoTreeListTissuesTool (1 tools)¶

本地工具：

OncoTree_list_tissues (from Oncotree Tools)

OncoTreeSearchTool (1 tools)¶

本地工具：

OncoTree_search (from Oncotree Tools)

OpenAIREDatasetTool (1 tools)¶

本地工具：

OpenAIRE_search_datasets (from Openaire Dataset Tools)

OpenAIRETool (1 tools)¶

本地工具：

OpenAIRE_search_publications（来自 Openaire 工具）

OpenAlexGuidelinesTool (1 tools)¶

本地工具：

OpenAlex_Guidelines_Search（来源：统一指南工具）

OpenAlexRESTTool (7 tools)¶

本地工具：

openalex_get_author (from Openalex 工具)
openalex_get_institution (from Openalex 工具)
openalex_get_work (from Openalex 工具)
openalex_get_work_by_doi (from Openalex 工具)
openalex_search_authors (from Openalex 工具)
openalex_search_institutions (from Openalex 工具)
openalex_search_works (from Openalex 工具)

OpenAlexTool（1 个工具）¶

本地工具：

openalex_literature_search（来自 Openalex 工具）

OpenCRAVATTool (2 tools)¶

本地工具：

OpenCRAVAT_annotate_variant (from Opencravat Tools)
OpenCRAVAT_list_annotators (from Opencravat Tools)

OpenFDAApprovalTool (3 tools)¶

本地工具：

OpenFDA_get_approval_history (from Openfda Approval Tools)
OpenFDA_get_approved_products (from Openfda Approval Tools)
OpenFDA_search_drug_approvals (from Openfda Approval Tools)

OpenFDADrugEventsTool (1 tools)¶

本地工具：

OpenFDA_search_drug_events (from Openfda Tools)

OpenNeuroTool (4 tools)¶

本地工具：

OpenNeuro_get_dataset (from Openneuro Tools)
OpenNeuro_get_dataset_snapshots (from Openneuro Tools)
OpenNeuro_list_datasets (from Openneuro Tools)
OpenNeuro_search_by_modality (from Openneuro Tools)

OpenTarget (62 tools)¶

本地工具：

OpenTargets_drug_pharmacogenomics_data（来自 Opentarget 工具）
OpenTargets_get_approved_indications_by_drug_chemblId（来源：Opentarget 工具）
OpenTargets_get_associated_diseases_by_drug_chemblId（来源：Opentarget 工具）
OpenTargets_get_associated_drugs_by_disease_efoId（来源：Opentarget 工具）
OpenTargets_get_associated_drugs_by_target_ensemblID（来源：Opentarget 工具）
OpenTargets_get_associated_phenotypes_by_disease_efoId（来自 Opentarget 工具）
OpenTargets_get_associated_targets_by_disease_efoId（来源：Opentarget 工具）
OpenTargets_get_associated_targets_by_drug_chemblId（来源：Opentarget 工具）
OpenTargets_get_biological_mouse_models_by_ensemblID（来源：Opentarget 工具）
OpenTargets_get_chemical_probes_by_target_ensemblID（来源：Opentarget 工具）
OpenTargets_get_credible_set_detail (from Opentarget Genetics Tools)
OpenTargets_get_disease_ancestors_parents_by_efoId（来源：Opentarget 工具）
OpenTargets_get_disease_descendants_children_by_efoId（来自：Opentarget 工具）
OpenTargets_get_disease_description_by_efoId（来源：Opentarget 工具）
OpenTargets_get_disease_id_description_by_name（来自：Opentarget 工具）
OpenTargets_get_disease_ids_by_efoId（来源：Idmap 工具）
OpenTargets_get_disease_ids_by_name（来自 Idmap 工具）
OpenTargets_get_disease_locations_by_efoId（来自：Opentarget 工具）
OpenTargets_get_disease_synonyms_by_efoId（来源：Opentarget 工具）
OpenTargets_get_disease_therapeutic_areas_by_efoId（来自 Opentarget 工具）
OpenTargets_get_diseases_phenotypes_by_target_ensembl（来源：Opentarget 工具）
OpenTargets_get_drug_adverse_events_by_chemblId（来源：Opentarget 工具）
OpenTargets_get_drug_approval_status_by_chemblId（来源：Opentarget 工具）
OpenTargets_get_drug_blackbox_status_by_chembl_ID (from Opentarget 工具)
OpenTargets_get_drug_description_by_chemblId（来源：Opentarget 工具）
OpenTargets_get_drug_indications_by_chemblId（来自 Opentarget 工具）
OpenTargets_get_drug_mechanisms_of_action_by_chemblId（来自：Opentarget 工具）
OpenTargets_get_drug_names_by_chemblId (from Opentarget 工具)
OpenTargets_get_drug_synonyms_by_chemblId（来自 Opentarget 工具）
OpenTargets_get_drug_trade_names_by_chemblId（来源：Opentarget 工具）
OpenTargets_get_drug_warnings_by_chemblId（来自 Opentarget 工具）
OpenTargets_get_evidence_by_datasource (from Opentarget 工具)
OpenTargets_get_gene_ontology_terms_by_goID（来自 Opentarget 工具）
OpenTargets_get_gwas_study (from Opentarget Genetics Tools)
OpenTargets_get_known_drugs_by_drug_chemblId（来源：Opentarget 工具）
OpenTargets_get_parent_child_molecules_by_chembl_ID (from Opentarget 工具)
OpenTargets_get_publications_by_disease_efoId（来自：Opentarget 工具）
OpenTargets_get_publications_by_drug_chemblId（来自 Opentarget 工具）
OpenTargets_get_publications_by_target_ensemblID（来源：Opentarget 工具）
OpenTargets_get_similar_entities_by_disease_efoId（来自 Opentarget 工具）
OpenTargets_get_similar_entities_by_drug_chemblId（来自 Opentarget 工具）
OpenTargets_get_similar_entities_by_target_ensemblID（来自 Opentarget 工具）
OpenTargets_get_study_credible_sets (from Opentarget Genetics Tools)
OpenTargets_get_target_classes_by_ensemblID（来自 Opentarget 工具）
OpenTargets_get_target_constraint_info_by_ensemblID（来源：Opentarget 工具）
OpenTargets_get_target_enabling_packages_by_ensemblID（来自 Opentarget 工具）
OpenTargets_get_target_gene_ontology_by_ensemblID（来自 Opentarget 工具）
OpenTargets_get_target_genomic_location_by_ensemblID（来自 Opentarget 工具）
OpenTargets_get_target_homologues_by_ensemblID（来自 Opentarget 工具）
OpenTargets_get_target_id_description_by_name（来源：Opentarget 工具）
OpenTargets_get_target_interactions_by_ensemblID（来自 Opentarget 工具）
OpenTargets_get_target_safety_profile_by_ensemblID（来源：Opentarget 工具）
OpenTargets_get_target_subcell_locations_by_ensembl_ID (from Opentarget 工具)
OpenTargets_get_target_synonyms_by_ensemblID（来自：Opentarget 工具）
OpenTargets_get_target_tractability_by_ensemblID（来自 Opentarget 工具）
OpenTargets_get_variant_credible_sets (from Opentarget Genetics Tools)
OpenTargets_get_variant_info (from Opentarget Genetics Tools)
OpenTargets_map_any_disease_id_to_all_other_ids（来自 Idmap 工具）
OpenTargets_multi_entity_search_by_query_string（来自 Opentarget 工具）
OpenTargets_search_category_counts_by_query_string（来自 Opentarget 工具）
OpenTargets_search_gwas_studies_by_disease (from Opentarget Genetics Tools)
OpenTargets_target_disease_evidence（来自 Opentarget 工具）

OpenTreeTool (4 tools)¶

本地工具：

OpenTree_get_induced_subtree (from Opentree Tools)
OpenTree_get_mrca (from Opentree Tools)
OpenTree_get_taxon (from Opentree Tools)
OpenTree_match_names (from Opentree Tools)

OpentargetToolDrugNameMatch（2 个工具）¶

本地工具：

OpenTargets_get_drug_chembId_by_generic_name（来源：Opentarget 工具）
OpenTargets_get_drug_id_description_by_name（来自 Opentarget 工具）

OrphanetTool (10 tools)¶

本地工具：

Orphanet_get_classification (from Orphanet Tools)
Orphanet_get_disease (from Orphanet Tools)
Orphanet_get_epidemiology (from Orphanet Tools)
Orphanet_get_gene_diseases (from Orphanet Tools)
Orphanet_get_genes (from Orphanet Tools)
Orphanet_get_icd_mapping (from Orphanet Tools)
Orphanet_get_natural_history (from Orphanet Tools)
Orphanet_get_phenotypes (from Orphanet Tools)
Orphanet_search_by_name (from Orphanet Tools)
Orphanet_search_diseases (from Orphanet Tools)

OrthoDBTool (3 tools)¶

本地工具：

OrthoDB_get_group_details (from Orthodb Tools)
OrthoDB_get_orthologs (from Orthodb Tools)
OrthoDB_search_groups (from Orthodb Tools)

OxOTool (2 tools)¶

本地工具：

OxO_get_ontology_mappings (from Oxo Tools)
OxO_search_ontology_mappings (from Oxo Tools)

PANTHERTool (3 tools)¶

本地工具：

PANTHER_enrichment (from Panther Tools)
PANTHER_gene_info (from Panther Tools)
PANTHER_ortholog (from Panther Tools)

PDBECompoundTool (2 tools)¶

本地工具：

PDBe_get_compound_structures (from Pdbe Compound Tools)
PDBe_get_compound_summary (from Pdbe Compound Tools)

PDBeAPIRESTTool (10 tools)¶

本地工具：

pdbe_get_entry_assemblies (from Pdbe Api Tools)
pdbe_get_entry_experiment (from Pdbe Api Tools)
pdbe_get_entry_molecules (from Pdbe Api Tools)
pdbe_get_entry_observed_residues_ratio (from Pdbe Api Tools)
pdbe_get_entry_publications (from Pdbe Api Tools)
pdbe_get_entry_quality (from Pdbe Api Tools)
pdbe_get_entry_related_publications (from Pdbe Api Tools)
pdbe_get_entry_secondary_structure (from Pdbe Api Tools)
pdbe_get_entry_status (from Pdbe Api Tools)
pdbe_get_entry_summary (from Pdbe Api Tools)

PDBeLigandsTool (2 tools)¶

本地工具：

PDBe_get_residue_listing (from Pdbe Ligands Tools)
PDBe_get_structure_ligands (from Pdbe Ligands Tools)

PDBePISATool (3 tools)¶

本地工具：

PDBePISA_get_assemblies (from Pdbepisa Tools)
PDBePISA_get_interfaces (from Pdbepisa Tools)
PDBePISA_get_monomer_analysis (from Pdbepisa Tools)

PDBeSIFTSTool (3 tools)¶

本地工具：

PDBeSIFTS_get_all_structures (from Pdbe Sifts Tools)
PDBeSIFTS_get_best_structures (from Pdbe Sifts Tools)
PDBeSIFTS_get_pdb_to_uniprot (from Pdbe Sifts Tools)

PDBeSearchTool (3 tools)¶

本地工具：

PDBeSearch_get_compound (from Pdbe Search Tools)
PDBeSearch_search_by_organism (from Pdbe Search Tools)
PDBeSearch_search_structures (from Pdbe Search Tools)

PDBeValidationTool (2 tools)¶

本地工具：

PDBeValidation_get_outlier_residues (from Pdbe Validation Tools)
PDBeValidation_get_quality_scores (from Pdbe Validation Tools)

PDBe_KB_Tool (4 tools)¶

本地工具：

PDBe_KB_get_interface_residues (from Pdbe Kb Tools)
PDBe_KB_get_ligand_sites (from Pdbe Kb Tools)
PDBe_KB_get_summary_stats (from Pdbe Kb Tools)
PDBe_KB_get_superposition_clusters (from Pdbe Kb Tools)

PDCTool (5 tools)¶

本地工具：

PDC_get_clinical_data (from Pdc Tools)
PDC_get_gene_protein (from Pdc Tools)
PDC_get_study_summary (from Pdc Tools)
PDC_list_programs (from Pdc Tools)
PDC_search_studies (from Pdc Tools)

PMCTool（1 个工具）¶

本地工具：

PMC_search_papers（来源：Pmc 工具）

PRIDERESTTool (3 tools)¶

本地工具：

PRIDE_get_project (from Pride Tools)
PRIDE_get_project_files (from Pride Tools)
PRIDE_search_proteomics (from Pride Tools)

PROSITETool (3 tools)¶

本地工具：

PROSITE_get_entry (from Prosite Tools)
PROSITE_scan_sequence (from Prosite Tools)
PROSITE_search (from Prosite Tools)

PackageTool (163 tools)¶

本地工具：

get_albumentations_info（来自图像处理工具）
get_altair_info（来自可视化工具）
get_anndata_info（来自单细胞工具）
get_arboreto_info（来自基因组学工具）
get_arxiv_info（来自生物信息学核心工具）
get_ase_info（来自结构生物学工具）
get_astropy_info（来自物理天文工具）
get_biopandas_info（来自结构生物学工具）
get_biopython_info（来自生物信息学核心工具）
get_bioservices_info（来自生物信息学核心工具）
get_biotite_info（来自生物信息学核心工具）
get_bokeh_info（来自可视化工具）
get_brian2_info（来自神经科学工具）
get_cartopy_info（来自地球科学工具）
get_catboost_info（来自机器学习工具）
get_cellpose_info（来自可视化工具）
get_cellrank_info（来自单细胞工具）
get_cellxgene_census_info（来自基因组学工具）
get_cftime_info（来自地球科学工具）
get_chembl_webresource_client_info（来自化学信息学工具）
get_clair3_info（来自基因组学工具）
get_cobra_info（来自化学信息学工具）
get_cobrapy_info（来自机器学习工具）
get_cooler_info（来源：科学计算工具）
get_cryosparc_tools_info（来自生物信息学核心工具）
get_cupy_info（来自科学计算工具）
get_cyvcf2_info（来自基因组学工具）
get_dask_info（来自科学计算工具）
get_datamol_info（来自化学信息学工具）
get_datashader_info（来自可视化工具）
get_deepchem_info（来自化学信息学工具）
get_deeppurpose_info（来自机器学习工具）
get_deeptools_info（来自基因组学工具）
get_deepxde_info（来自机器学习工具）
get_dendropy_info（来自生物信息学核心工具）
get_descriptastorus_info（来自：结构生物学工具）
get_diffdock_info（来自：结构生物学工具）
get_dscribe_info（来自化学信息学工具）
get_elephant_info（来自神经科学工具）
get_episcanpy_info（来自单细胞工具）
get_ete3_info（来自生物信息学核心工具）
get_faiss_info（来自机器学习工具）
get_fanc_info（来自生物信息学核心工具）
get_flask_info（来自生物信息学核心工具）
get_flowio_info（来自生物信息学核心工具）
get_flowkit_info（来自生物信息学核心工具）
get_flowutils_info（来自科学计算工具）
get_freesasa_info（来自结构生物学工具）
get_galpy_info（来自物理天文工具）
get_geopandas_info（来自地球科学工具）
get_gget_info（来自生物信息学核心工具）
get_googlesearch_python_info（来源：生物信息学核心工具）
get_gseapy_info（来自基因组学工具）
get_h5py_info（来自科学计算工具）
get_harmony_pytorch_info（来源：机器学习工具）
get_hmmlearn_info（来自机器学习工具）
get_holoviews_info（来自可视化工具）
get_htmd_info（来自结构生物学工具）
get_igraph_info（来自：可视化工具）
get_imageio_info（来自图像处理工具）
get_imbalanced_learn_info（来自机器学习工具）
get_jcvi_info（来自基因组学工具）
get_joblib_info（来自科学计算工具）
get_khmer_info（来自生物信息学核心工具）
get_kipoiseq_info（来自基因组学工具）
get_lifelines_info（来自生物信息学核心工具）
get_lightgbm_info（来自机器学习工具）
get_loompy_info（来自生物信息学核心工具）
get_mageck_info（来自生物信息学核心工具）
get_matplotlib_info（来自可视化工具）
get_mdanalysis_info（来自结构生物学工具）
get_mdtraj_info（来自结构生物学工具）
get_mne_info（来自神经科学工具）
get_molfeat_info（来自化学信息学工具）
get_molvs_info（来自化学信息学工具）
get_mordred_info（来自化学信息学工具）
get_msprime_info（来自生物信息学核心工具）
get_mudata_info（来自单细胞工具）
get_neo_info（来自神经科学工具）
get_netcdf4_info（来自地球科学工具）
get_networkx_info（来自生物信息学核心工具）
get_nglview_info（来自结构生物学工具）
get_nilearn_info（来自神经科学工具）
get_numba_info（来自生物信息学核心工具）
get_numpy_info（来自科学计算工具）
get_openbabel_info（来自化学信息学工具）
get_openchem_info（来自化学信息学工具）
get_opencv_info（来自可视化工具）
get_openmm_info（来自结构生物学工具）
get_optlang_info（来自科学计算工具）
get_optuna_info（来自机器学习工具）
get_palantir_info（来自单细胞工具）
get_pandas_info（来自科学计算工具）
get_patsy_info（来自科学计算工具）
get_pdbfixer_info（来自生物信息学核心工具）
get_pillow_info（来自图像处理工具）
get_plantcv_info（来自可视化工具）
get_plip_info（来自生物信息学核心工具）
get_plotly_info（来自可视化工具）
get_poliastro_info（来自生物信息学核心工具）
get_poretools_info（来自基因组学工具）
get_prody_info（来自生物信息学核心工具）
get_pubchempy_info（来自化学信息学工具）
get_pybedtools_info（来自基因组学工具）
get_pybigwig_info（来自生物信息学核心工具）
get_pydeseq2_info（来自基因组学工具）
get_pyensembl_info（来自基因组学工具）
get_pyephem_info（来自：物理天文工具）
get_pyfaidx_info（来自基因组学工具）
get_pyfasta_info（来自基因组学工具）
get_pykalman_info（来自生物信息学核心工具）
get_pyliftover_info（来自基因组学工具）
get_pymassspec_info（来自生物信息学核心工具）
get_pymed_info（来自生物信息学核心工具）
get_pymzml_info（来自机器学习工具）
get_pypdf2_info（来自生物信息学核心工具）
get_pyranges_info（来自基因组学工具）
get_pyrosetta_info（来自结构生物学工具）
get_pysam_info（来自基因组学工具）
get_pyscenic_info（来自单细胞工具）
get_pyscf_info（来自结构生物学工具）
get_pyscreener_info（来自生物信息学核心工具）
get_pytdc_info（来自生物信息学核心工具）
get_python_libsbml_info（来自机器学习工具）
get_pytorch_info（来自机器学习工具）
get_pyvcf_info（来自基因组学工具）
get_pyvis_info（来自可视化工具）
get_qutip_info（来自物理天文工具）
get_rasterio_info（来源：地球科学工具）
get_rdkit_info（来自化学信息学工具）
get_reportlab_info（来源：基因组学工具）
get_requests_info（来自生物信息学核心工具）
get_ruptures_info（来自生物信息学核心工具）
get_scanorama_info（来自单细胞工具）
get_scanpy_info（来自单细胞工具）
get_schnetpack_info（来自机器学习工具）
get_scholarly_info（来自生物信息学核心工具）
get_scikit_bio_info（来自生物信息学核心工具）
get_scikit_image_info（来自可视化工具）
get_scikit_learn_info（来自机器学习工具）
get_scipy_info（来自科学计算工具）
get_scrublet_info（来自单细胞工具）
get_scvelo_info（来自单细胞工具）
get_scvi_tools_info（来自单细胞工具）
get_seaborn_info（来自可视化工具）
get_skopt_info（来自机器学习工具）
get_souporcell_info（来自单细胞工具）
get_statsmodels_info（来自机器学习工具）
get_sunpy_info（来自：物理天文工具）
get_sympy_info（来自科学计算工具）
get_tiledb_info（来自科学计算工具）
get_tiledbsoma_info（来自单细胞工具）
get_torch_geometric_info（来自机器学习工具）
get_tqdm_info（来自科学计算工具）
get_trackpy_info（来自生物信息学核心工具）
get_tskit_info（来自生物信息学核心工具）
get_umap_learn_info（来自机器学习工具）
get_velocyto_info（来自单细胞工具）
get_viennarna_info（来自基因组学工具）
get_xarray_info（来自科学计算工具）
get_xesmf_info（来自地球科学工具）
get_xgboost_info（来自机器学习工具）
get_zarr_info（来自：科学计算工具）

PaleobiologyRESTTool (1 tools)¶

本地工具：

Paleobiology_get_fossils (from Paleobiology Tools)

PathwayCommonsTool (7 tools)¶

本地工具：

PathwayCommons_get_neighborhood (from Pathwaycommons Tools)
PathwayCommons_get_pathway (from Pathwaycommons Tools)
PathwayCommons_search (from Pathwaycommons Tools)
pc_get_interactions (from Pathway Commons Tools)
pc_get_interactions (from Pathway Commons Tools)
pc_search_pathways (from Pathway Commons Tools)
pc_search_pathways (from Pathway Commons Tools)

PfamTool (6 tools)¶

本地工具：

Pfam_get_family_detail (from Pfam Tools)
Pfam_get_family_proteins (from Pfam Tools)
Pfam_get_family_proteomes (from Pfam Tools)
Pfam_get_protein_annotations (from Pfam Tools)
Pfam_search_clans (from Pfam Tools)
Pfam_search_families (from Pfam Tools)

PharmGKBTool (7 tools)¶

本地工具：

PharmGKB_get_clinical_annotations (from Pharmgkb Tools)
PharmGKB_get_dosing_guidelines (from Pharmgkb Tools)
PharmGKB_get_drug_details (from Pharmgkb Tools)
PharmGKB_get_gene_details (from Pharmgkb Tools)
PharmGKB_search_drugs (from Pharmgkb Tools)
PharmGKB_search_genes (from Pharmgkb Tools)
PharmGKB_search_variants (from Pharmgkb Tools)

PharmacoDBTool (6 tools)¶

本地工具：

PharmacoDB_get_biomarker_assoc (from Pharmacodb Tools)
PharmacoDB_get_cell_line (from Pharmacodb Tools)
PharmacoDB_get_compound (from Pharmacodb Tools)
PharmacoDB_get_experiments (from Pharmacodb Tools)
PharmacoDB_list_datasets (from Pharmacodb Tools)
PharmacoDB_search (from Pharmacodb Tools)

PharosTool (4 tools)¶

本地工具：

Pharos_get_disease_targets (from Pharos Tools)
Pharos_get_target (from Pharos Tools)
Pharos_get_tdl_summary (from Pharos Tools)
Pharos_search_targets (from Pharos Tools)

PlantReactomeTool (3 tools)¶

本地工具：

PlantReactome_get_pathway (from Plant Reactome Tools)
PlantReactome_list_species (from Plant Reactome Tools)
PlantReactome_search_pathways (from Plant Reactome Tools)

PomBaseTool (3 tools)¶

本地工具：

PomBase_get_gene (from Pombase Tools)
PomBase_get_gene_phenotypes (from Pombase Tools)
PomBase_search_genes (from Pombase Tools)

PopGenTool (4 tools)¶

本地工具：

PopGen_fst (from Popgen Tools)
PopGen_haplotype_count (from Popgen Tools)
PopGen_hwe_test (from Popgen Tools)
PopGen_inbreeding (from Popgen Tools)

ProgenetixTool (5 tools)¶

本地工具：

Progenetix_cnv_search (from Progenetix Tools)
Progenetix_list_cohorts (from Progenetix Tools)
Progenetix_list_filtering_terms (from Progenetix Tools)
Progenetix_search_biosamples (from Progenetix Tools)
Progenetix_search_individuals (from Progenetix Tools)

ProtParamTool (1 tools)¶

本地工具：

ProtParam_calculate (from Protparam Tools)

ProtVarFunctionTool (1 tools)¶

本地工具：

ProtVar_get_function (from Protvar Tools)

ProtVarPopulationTool (1 tools)¶

本地工具：

ProtVar_get_population (from Protvar Tools)

ProtVarTool (1 tools)¶

本地工具：

ProtVar_map_variant (from Protvar Tools)

ProtacDBTool (3 tools)¶

本地工具：

ProtacDB_get_protac (from Protacdb Tools)
ProtacDB_search_protacs (from Protacdb Tools)
ProtacDB_search_targets (from Protacdb Tools)

ProteinStructure3DTool (1 tools)¶

本地工具：

visualize_protein_structure_3d (from 蛋白质结构3D工具)

ProteinsAPIRESTTool (10 tools)¶

本地工具：

proteins_api_get_comments (from Proteins Api Tools)
proteins_api_get_epitopes (from Proteins Api Tools)
proteins_api_get_features (from Proteins Api Tools)
proteins_api_get_genome_mappings (from Proteins Api Tools)
proteins_api_get_protein (from Proteins Api Tools)
proteins_api_get_proteomics (from Proteins Api Tools)
proteins_api_get_publications (from Proteins Api Tools)
proteins_api_get_variants (from Proteins Api Tools)
proteins_api_get_xrefs (from Proteins Api Tools)
proteins_api_search (from Proteins Api Tools)

ProteinsPlusRESTTool (5 tools)¶

本地工具：

ProteinsPlus_analyze_binding_site_similarity (from Proteinsplus Tools)
ProteinsPlus_generate_interaction_diagram (from Proteinsplus Tools)
ProteinsPlus_predict_binding_sites (from Proteinsplus Tools)
ProteinsPlus_predict_binding_sites_v3 (from Proteinsplus Tools)
ProteinsPlus_profile_structure_quality (from Proteinsplus Tools)

ProteomeXchangeTool (2 tools)¶

本地工具：

ProteomeXchange_get_dataset (from Proteomexchange Tools)
ProteomeXchange_search_datasets (from Proteomexchange Tools)

ProteomicsDBTool (4 tools)¶

本地工具：

ProteomicsDB_get_expression_summary (from Proteomicsdb Tools)
ProteomicsDB_get_protein_expression (from Proteomicsdb Tools)
ProteomicsDB_list_tissues (from Proteomicsdb Tools)
ProteomicsDB_search_proteins (from Proteomicsdb Tools)

PubChemBioAssayTool (3 tools)¶

本地工具：

PubChemBioAssay_get_assay (from Pubchem Bioassay Tools)
PubChemBioAssay_get_assay_summary (from Pubchem Bioassay Tools)
PubChemBioAssay_search_by_gene (from Pubchem Bioassay Tools)

PubChemRESTTool (18 tools)¶

本地工具：

PubChem_get_CID_by_SMILES（来自 PubChem 工具）
PubChem_get_CID_by_compound_name（来源：PubChem 工具）
PubChem_get_assay_active_compounds (from PubChem 工具)
PubChem_get_assay_description (from PubChem 工具)
PubChem_get_assay_dose_response (from PubChem 工具)
PubChem_get_assay_summary (from PubChem 工具)
PubChem_get_assay_targets (from PubChem 工具)
PubChem_get_assays_for_compound_active (from PubChem 工具)
PubChem_get_associated_patents_by_CID（来源：PubChem 工具）
PubChem_get_compound_2D_image_by_CID（来自 PubChem 工具）
PubChem_get_compound_bioactivity (from PubChem 工具)
PubChem_get_compound_properties_by_CID（来源：PubChem 工具）
PubChem_get_compound_synonyms_by_CID（来源：PubChem 工具）
PubChem_get_compound_xrefs_by_CID（来源：PubChem 工具）
PubChem_search_assays_by_target_gene (from PubChem 工具)
PubChem_search_assays_by_type (from PubChem 工具)
PubChem_search_compounds_by_similarity（来自 PubChem 工具）
PubChem_search_compounds_by_substructure（来源：PubChem 工具）

PubChemToxTool (6 tools)¶

本地工具：

PubChemTox_get_acute_effects (from Pubchem Tox Tools)
PubChemTox_get_carcinogen_classification (from Pubchem Tox Tools)
PubChemTox_get_ghs_classification (from Pubchem Tox Tools)
PubChemTox_get_target_organs (from Pubchem Tox Tools)
PubChemTox_get_toxicity_summary (from Pubchem Tox Tools)
PubChemTox_get_toxicity_values (from Pubchem Tox Tools)

PubMedGuidelinesTool (1 tools)¶

本地工具：

PubMed_Guidelines_Search（来源：统一指南工具）

PubMedRESTTool (5 tools)¶

本地工具：

PubMed_get_article (from Pubmed 工具)
PubMed_get_cited_by (from Pubmed 工具)
PubMed_get_links (from Pubmed 工具)
PubMed_get_related (from Pubmed 工具)
PubMed_search_articles（来自 Pubmed 工具）

PubTatorTool（2 个工具）¶

本地工具：

PubTator3_EntityAutocomplete（来自 Pubtator 工具）
PubTator3_LiteratureSearch（来源：Pubtator 工具）

PyPIPackageInspector (1 tools)¶

本地工具：

PyPIPackageInspector (from Pypi Package Inspector Tools)

PythonCodeExecutor (1 tools)¶

本地工具：

python_code_executor (from Python Executor Tools)

PythonScriptRunner (1 tools)¶

本地工具：

python_script_runner (from Python Executor Tools)

QuickGOTool (4 tools)¶

本地工具：

QuickGO_annotations_by_gene (from Quickgo Tools)
QuickGO_annotations_by_goterm (from Quickgo Tools)
QuickGO_get_term_children (from Quickgo Tools)
QuickGO_get_term_detail (from Quickgo Tools)

RCSBAdvancedSearchTool (2 tools)¶

本地工具：

RCSBAdvSearch_search_by_motif (from Rcsb Advanced Search Tools)
RCSBAdvSearch_search_structures (from Rcsb Advanced Search Tools)

RCSBDataTool (3 tools)¶

本地工具：

RCSBData_get_assembly (from Rcsb Data Tools)
RCSBData_get_entry (from Rcsb Data Tools)
RCSBData_get_nonpolymer_entity (from Rcsb Data Tools)

RCSBGraphQLTool (3 tools)¶

本地工具：

RCSBGraphQL_get_ligand_info (from Rcsb Graphql Tools)
RCSBGraphQL_get_polymer_entity (from Rcsb Graphql Tools)
RCSBGraphQL_get_structure_summary (from Rcsb Graphql Tools)

RCSBSearchTool (1 tools)¶

本地工具：

PDB_search_similar_structures (from Rcsb Search Tools)

RCSBTool（39个工具）¶

本地工具：

get_assembly_info_by_pdb_id（来自：Rcsb Pdb 工具集）
get_assembly_summary（来自 Rcsb Pdb 工具集）
get_binding_affinity_by_pdb_id（来自 Rcsb Pdb 工具集）
get_chem_comp_audit_info（来自 Rcsb Pdb 工具集）
get_chem_comp_charge_and_ambiguity（来自 Rcsb Pdb 工具集）
get_citation_info_by_pdb_id（来自 Rcsb Pdb 工具集）
get_core_refinement_statistics（来自 Rcsb Pdb 工具集）
get_crystal_growth_conditions_by_pdb_id（来自 Rcsb Pdb 工具集）
get_crystallization_ph_by_pdb_id（来自 Rcsb Pdb 工具集）
get_crystallographic_properties_by_pdb_id（来自 Rcsb Pdb 工具集）
get_ec_number_by_entity_id（来自 Rcsb Pdb 工具集）
get_em_3d_fitting_and_reconstruction_details（来自 Rcsb Pdb 工具集）
get_emdb_ids_by_pdb_id（来自 Rcsb Pdb 工具集）
get_gene_name_by_entity_id（来自 Rcsb Pdb 工具集）
get_host_organism_by_pdb_id（来自 Rcsb Pdb 工具集）
get_ligand_bond_count_by_pdb_id（来自 Rcsb Pdb 工具集）
get_ligand_smiles_by_chem_comp_id（来自 Rcsb Pdb 工具集）
get_mutation_annotations_by_pdb_id（来自 Rcsb Pdb 工具集）
get_oligosaccharide_descriptors_by_entity_id（来自 Rcsb Pdb 工具集）
get_polymer_entity_annotations（来自 Rcsb Pdb 工具集）
get_polymer_entity_count_by_pdb_id（来自 Rcsb Pdb 工具集）
get_polymer_entity_ids_by_pdb_id（来自 Rcsb Pdb 工具集）
get_polymer_entity_type_by_entity_id（来自 Rcsb Pdb 工具集）
get_polymer_molecular_weight_by_entity_id（来自 Rcsb Pdb 工具集）
get_protein_classification_by_pdb_id（来自 Rcsb Pdb 工具集）
get_protein_metadata_by_pdb_id（来自 Rcsb Pdb 工具集）
get_refinement_resolution_by_pdb_id（来自 Rcsb Pdb 工具集）
get_release_deposit_dates_by_pdb_id（来自 Rcsb Pdb 工具集）
get_sequence_by_pdb_id（来自 Rcsb Pdb 工具集）
get_sequence_lengths_by_pdb_id（来自 Rcsb Pdb 工具集）
get_sequence_positional_features_by_instance_id（来自 Rcsb Pdb 工具集）
get_source_organism_by_pdb_id（来自 Rcsb Pdb 工具集）
get_space_group_by_pdb_id（来自 Rcsb Pdb 工具集）
get_structure_determination_software_by_pdb_id（来自：Rcsb Pdb 工具集）
get_structure_title_by_pdb_id（来自 Rcsb Pdb 工具集）
get_structure_validation_metrics_by_pdb_id（来自 Rcsb Pdb 工具集）
get_target_cofactor_info（来自 Rcsb Pdb 工具集）
get_taxonomy_by_pdb_id（来自 Rcsb Pdb 工具集）
get_uniprot_accession_by_entity_id（来自 Rcsb Pdb 工具集）

RDKitCheminfoTool (2 tools)¶

本地工具：

RDKit_matched_molecular_pair (from Rdkit Cheminfo Tools)
RDKit_pharmacophore_features (from Rdkit Cheminfo Tools)

RGDTool (4 tools)¶

本地工具：

RGD_get_annotations (from Rgd Tools)
RGD_get_gene (from Rgd Tools)
RGD_get_orthologs (from Rgd Tools)
RGD_search_genes (from Rgd Tools)

RNAcentralGetTool (1 tools)¶

本地工具：

RNAcentral_get_by_accession (from Rnacentral Tools)

RNAcentralSearchTool (1 tools)¶

本地工具：

RNAcentral_search (from Rnacentral Tools)

Re3DataTool (2 tools)¶

本地工具：

re3data_get_repository (from Re3Data Tools)
re3data_search_repositories (from Re3Data Tools)

ReMapRESTTool (1 tools)¶

本地工具：

ReMap_get_transcription_factor_binding (from Remap Tools)

ReactomeAnalysisTool (3 tools)¶

本地工具：

ReactomeAnalysis_pathway_enrichment (from Reactome Analysis Tools)
ReactomeAnalysis_species_comparison (from Reactome Analysis Tools)
ReactomeAnalysis_token_result (from Reactome Analysis Tools)

ReactomeContentTool (3 tools)¶

本地工具：

ReactomeContent_get_contained_events (from Reactome Content Tools)
ReactomeContent_get_enhanced_pathway (from Reactome Content Tools)
ReactomeContent_search (from Reactome Content Tools)

ReactomeInteractorsTool (3 tools)¶

本地工具：

ReactomeInteractors_get_entity_pathways (from Reactome Interactors Tools)
ReactomeInteractors_get_protein_interactors (from Reactome Interactors Tools)
ReactomeInteractors_search_entity (from Reactome Interactors Tools)

ReactomeRESTTool (20 tools)¶

本地工具：

Reactome_get_complex (from Reactome 工具)
Reactome_get_database_version (from Reactome 工具)
Reactome_get_diseases (from Reactome 工具)
Reactome_get_entity_compartment (from Reactome 工具)
Reactome_get_entity_events (from Reactome 工具)
Reactome_get_event_ancestors (from Reactome 工具)
Reactome_get_events_hierarchy (from Reactome 工具)
Reactome_get_interactor (from Reactome 工具)
Reactome_get_participant_reference_entities (from Reactome 工具)
Reactome_get_participants (from Reactome 工具)
Reactome_get_pathway (from Reactome 工具)
Reactome_get_pathway_hierarchy (from Reactome 工具)
Reactome_get_pathway_reactions（来自 Reactome 工具）
Reactome_get_pathways_low_entity (from Reactome 工具)
Reactome_get_reaction (from Reactome 工具)
Reactome_list_species (from Reactome 工具)
Reactome_list_top_pathways (from Reactome 工具)
Reactome_map_uniprot_to_pathways (from Reactome 工具)
Reactome_map_uniprot_to_reactions (from Reactome 工具)
Reactome_query_by_ids (from Reactome 工具)

RegulomeDBRESTTool (1 tools)¶

本地工具：

RegulomeDB_query_variant (from Regulomedb Tools)

RemoteTool（14 个工具）¶

远程工具：

boltz2_docking（来自：Boltz 工具）
compute_depmap24q2_gene_correlations（来自：Depmap 工具）
consult_human_expert（来自：专家反馈工具）
get_abstract_from_patent_app_number（来自 USPTO 下载工具）
get_claims_from_patent_app_number（来自 USPTO 下载工具）
get_expert_response（来自专家反馈工具）
get_expert_status（来自专家反馈工具）
get_full_text_from_patent_app_number（来自 USPTO 下载工具）
list_pending_expert_requests（来自专家反馈工具）
mcp_auto_loader_human_expert（来自专家反馈工具）
run_compass_prediction（来自免疫指南工具）
run_pinnacle_ppi_retrieval（来源：巅峰工具）
run_transcriptformer_embedding_retrieval（来自 Transcriptformer 工具）
submit_expert_response（来自专家反馈工具）

RfamTool (9 tools)¶

本地工具：

Rfam_accession_to_id (from Rfam Tools)
Rfam_get_alignment (from Rfam Tools)
Rfam_get_covariance_model (from Rfam Tools)
Rfam_get_family (from Rfam Tools)
Rfam_get_sequence_regions (from Rfam Tools)
Rfam_get_structure_mapping (from Rfam Tools)
Rfam_get_tree_data (from Rfam Tools)
Rfam_id_to_accession (from Rfam Tools)
Rfam_search_sequence (from Rfam Tools)

RheaTool (3 tools)¶

本地工具：

Rhea_search_by_chebi (from Rhea Tools)
Rhea_search_by_ec (from Rhea Tools)
Rhea_search_reactions (from Rhea Tools)

RxClassTool (3 tools)¶

本地工具：

RxClass_find_classes (from Rxclass Tools)
RxClass_get_class_members (from Rxclass Tools)
RxClass_get_drug_classes (from Rxclass Tools)

RxNormExtendedTool (3 tools)¶

本地工具：

RxNorm_find_rxcui (from Rxnorm Extended Tools)
RxNorm_get_drug_info (from Rxnorm Extended Tools)
RxNorm_get_related_drugs (from Rxnorm Extended Tools)

RxNormTool (1 tools)¶

本地工具：

RxNorm_get_drug_names (from Rxnorm Tools)

SABIORKTool (1 tools)¶

本地工具：

SABIO_RK_search_reactions (from Sabiork Tools)

SASBDBRESTTool (4 tools)¶

本地工具：

SASBDB_get_entries_by_tag (from Sasbdb Tools)
SASBDB_get_entries_by_uniprot (from Sasbdb Tools)
SASBDB_get_entry (from Sasbdb Tools)
SASBDB_list_instruments (from Sasbdb Tools)

SASBDBSearchTool (1 tools)¶

本地工具：

SASBDB_search_entries (from Sasbdb Tools)

SASBDBTextSearchTool (1 tools)¶

本地工具：

SASBDB_search (from Sasbdb Tools)

SAbDabTool (3 tools)¶

本地工具：

SAbDab_get_structure (from Sabdab Tools)
SAbDab_get_summary (from Sabdab Tools)
SAbDab_search_structures (from Sabdab Tools)

SCExpressionAtlasTool (2 tools)¶

本地工具：

SCXA_list_experiments (from Scxa Tools)
SCXA_search_gene (from Scxa Tools)

SCREENRESTTool (1 tools)¶

本地工具：

SCREEN_get_regulatory_elements (from Screen Tools)

SGDTool (5 tools)¶

本地工具：

SGD_get_gene (from Sgd Tools)
SGD_get_go_annotations (from Sgd Tools)
SGD_get_interactions (from Sgd Tools)
SGD_get_phenotypes (from Sgd Tools)
SGD_search (from Sgd Tools)

SIGNListGuidelinesTool (1 tools)¶

本地工具：

SIGN_list_guidelines (from 统一指南工具)

SIGNORTool (3 tools)¶

本地工具：

SIGNOR_get_interactions (from Signor Tools)
SIGNOR_get_pathway (from Signor Tools)
SIGNOR_list_pathways (from Signor Tools)

SIGNSearchGuidelinesTool (1 tools)¶

本地工具：

SIGN_search_guidelines (from 统一指南工具)

SIMBADAdvancedTool (1 tools)¶

本地工具：

SIMBAD_advanced_query (from Simbad Tools)

SIMBADTool (1 tools)¶

本地工具：

SIMBAD_query_object (from Simbad Tools)

SMILESVerifyTool (1 tools)¶

本地工具：

SMILES_verify (from Smiles Verify Tools)

SRATool (2 tools)¶

本地工具：

SRA_get_experiment (from Sra Tools)
SRA_search_experiments (from Sra Tools)

STITCHTool (3 tools)¶

本地工具：

STITCH_get_chemical_protein_interactions (from Stitch Tools)
STITCH_get_interaction_partners (from Stitch Tools)
STITCH_resolve_identifier (from Stitch Tools)

STRINGExtTool (2 tools)¶

本地工具：

STRING_get_enrichment (from String Ext Tools)
STRING_get_functional_annotations (from String Ext Tools)

STRINGRESTTool (4 tools)¶

本地工具：

STRING_functional_enrichment (from Ppi 工具)
STRING_get_protein_interactions (from Ppi 工具)
STRING_map_identifiers (from Ppi 工具)
STRING_ppi_enrichment (from Ppi 工具)

SYNERGxDBTool (7 tools)¶

本地工具：

SYNERGxDB_get_combo_matrix (from Synergxdb Tools)
SYNERGxDB_get_combo_stats (from Synergxdb Tools)
SYNERGxDB_get_drug (from Synergxdb Tools)
SYNERGxDB_list_cell_lines (from Synergxdb Tools)
SYNERGxDB_list_datasets (from Synergxdb Tools)
SYNERGxDB_list_drugs (from Synergxdb Tools)
SYNERGxDB_search_combos (from Synergxdb Tools)

ScientificCalculatorTool (5 tools)¶

本地工具：

DNA_translate_reading_frames (from Scientific Calculator Tools)
EnzymeKinetics_calculate (from Scientific Calculator Tools)
EquilibriumSolver_calculate (from Scientific Calculator Tools)
MolecularFormula_analyze (from Scientific Calculator Tools)
Statistics_test (from Scientific Calculator Tools)

SearchSPLTool（1 个工具）¶

本地工具：

DailyMed_search_spls（来源：Dailymed 工具）

SemanticScholarPDFSnippetsTool (1 tools)¶

本地工具：

SemanticScholar_get_pdf_snippets (from 语义学者工具)

SemanticScholarTool（1 个工具）¶

本地工具：

SemanticScholar_search_papers（来源：语义学者工具）

SequenceAnalyzeTool (4 tools)¶

本地工具：

Sequence_count_residues (from Sequence Analyze Tools)
Sequence_gc_content (from Sequence Analyze Tools)
Sequence_reverse_complement (from Sequence Analyze Tools)
Sequence_stats (from Sequence Analyze Tools)

SiderTool (5 tools)¶

本地工具：

SIDER_get_drug_indications (from Sider Tools)
SIDER_get_drug_side_effects (from Sider Tools)
SIDER_get_drugs_for_side_effect (from Sider Tools)
SIDER_search_drug (from Sider Tools)
SIDER_search_side_effect (from Sider Tools)

SmolAgentTool (2 tools)¶

本地工具：

advanced_literature_search_agent (from Smolagent Tools)
open_deep_research_agent (from Smolagent Tools)

SpecialTool（2 个工具）¶

本地工具：

CallAgent（来自专用工具）
完成（来自专用工具）

SpliceAITool (3 tools)¶

本地工具：

SpliceAI_get_max_delta (from Spliceai Tools)
SpliceAI_predict_pangolin (from Spliceai Tools)
SpliceAI_predict_splice (from Spliceai Tools)

SurvivalTool (3 tools)¶

本地工具：

Survival_cox_regression (from Survival Tools)
Survival_kaplan_meier (from Survival Tools)
Survival_log_rank_test (from Survival Tools)

SwissADMETool (2 tools)¶

本地工具：

SwissADME_calculate_adme (from Swissadme Tools)
SwissADME_check_druglikeness (from Swissadme Tools)

SwissDockTool (3 tools)¶

本地工具：

SwissDock_check_job_status (from Swissdock Tools)
SwissDock_dock_ligand (from Swissdock Tools)
SwissDock_retrieve_results (from Swissdock Tools)

SwissModelTool (2 tools)¶

本地工具：

SwissModel_get_models (from Swissmodel Tools)
SwissModel_get_summary (from Swissmodel Tools)

SwissTargetTool (2 tools)¶

本地工具：

SwissTargetPrediction_organisms (from Swiss Target Tools)
SwissTargetPrediction_predict (from Swiss Target Tools)

SynBioHubTool (3 tools)¶

本地工具：

SynBioHub_get_collections (from Synbiohub Tools)
SynBioHub_get_part (from Synbiohub Tools)
SynBioHub_search_parts (from Synbiohub Tools)

T3DBTool (2 tools)¶

本地工具：

T3DB_get_toxin (from T3Db Tools)
T3DB_search_toxins (from T3Db Tools)

TCDBTool (3 tools)¶

本地工具：

TCDB_get_transporter (from Tcdb Tools)
TCDB_search_by_substrate (from Tcdb Tools)
TCDB_search_family (from Tcdb Tools)

TIMERTool (3 tools)¶

本地工具：

TIMER2_gene_correlation (from Timer Tools)
TIMER2_immune_estimation (from Timer Tools)
TIMER2_survival_association (from Timer Tools)

TRIPDatabaseTool (1 tools)¶

本地工具：

TRIP_Database_Guidelines_Search（来源：统一指南工具）

TextDownloadTool (1 tools)¶

本地工具：

download_text_content (from File Download Tools)

TheraSAbDabTool (3 tools)¶

本地工具：

TheraSAbDab_get_all_therapeutics (from Therasabdab Tools)
TheraSAbDab_search_by_target (from Therasabdab Tools)
TheraSAbDab_search_therapeutics (from Therasabdab Tools)

ThreeDBeaconsTool (2 tools)¶

本地工具：

ThreeDBeacons_get_structure_summary (from Three D Beacons Tools)
ThreeDBeacons_get_structures (from Three D Beacons Tools)

ToolFinderEmbedding（2 个工具）¶

本地工具：

Tool_Finder（来源：查找器工具）
Tool_RAG（来自查找器工具）

ToolFinderKeyword（1 个工具）¶

本地工具：

Tool_Finder_Keyword（来自查找器工具）

ToolFinderLLM（1 个工具）¶

本地工具：

Tool_Finder_LLM（来源：查找器工具）

ToolUniversePageTool (1 tools)¶

本地工具：

get_tool_page_url (from Tooluniverse Page Tools)

UCSCEpigenomicsTool (3 tools)¶

本地工具：

UCSC_get_cpg_islands (from Epigenomics Tools)
UCSC_get_encode_cCREs (from Epigenomics Tools)
UCSC_get_tf_binding_clusters (from Epigenomics Tools)

UCSCGenomeTool (3 tools)¶

本地工具：

UCSC_get_sequence (from Ucsc Genome Tools)
UCSC_get_track (from Ucsc Genome Tools)
UCSC_search (from Ucsc Genome Tools)

UMLSRESTTool (5 tools)¶

本地工具：

icd_search_codes (from Umls Tools)
loinc_search_codes (from Umls Tools)
snomed_search_concepts (from Umls Tools)
umls_get_concept_details (from Umls Tools)
umls_search_concepts (from Umls Tools)

URLHTMLTagTool（1 个工具）¶

本地工具：

get_webpage_title（来自 URL 获取工具）

URLToPDFTextTool（1 个工具）¶

本地工具：

get_webpage_text_from_url（来自 URL 获取工具）

USPTOOpenDataPortalTool（6个工具）¶

本地工具：

get_associated_documents_metadata（来自 USPTO 工具）
get_patent_application_metadata（来自 USPTO 工具）
get_patent_continuity_data（来自 USPTO 工具）
get_patent_foreign_priority_data（来自：USPTO 工具）
get_patent_overview_by_text_query（来自 USPTO 工具）
get_patent_term_adjustment_data（来自 USPTO 工具）

UniChemTool (2 tools)¶

本地工具：

UniChem_list_sources (from Unichem Tools)
UniChem_search_compound (from Unichem Tools)

UniParcTool (2 tools)¶

本地工具：

UniParc_get_entry (from Uniparc Tools)
UniParc_search (from Uniparc Tools)

UniProtIDMappingTool (4 tools)¶

本地工具：

UniProtIDMap_convert_ids (from Uniprot Idmapping Tools)
UniProtIDMap_gene_to_uniprot (from Uniprot Idmapping Tools)
UniProtIDMap_list_databases (from Uniprot Idmapping Tools)
UniProtIDMap_to_pdb (from Uniprot Idmapping Tools)

UniProtLocationsTool (2 tools)¶

本地工具：

UniProtLocations_get_location (from Uniprot Locations Tools)
UniProtLocations_search (from Uniprot Locations Tools)

UniProtRESTTool (17 tools)¶

本地工具：

UniProt_get_alternative_names_by_accession（来自 Uniprot 工具）
UniProt_get_disease_variants_by_accession（来自 Uniprot 工具）
UniProt_get_entry_by_accession（来自 Uniprot 工具）
UniProt_get_function_by_accession（来自 Uniprot 工具）
UniProt_get_isoform_ids_by_accession（来自 Uniprot 工具）
UniProt_get_organism_by_accession（来自 Uniprot 工具）
UniProt_get_proteome (from Uniprot 工具)
UniProt_get_ptm_processing_by_accession（来源：Uniprot 工具）
UniProt_get_recommended_name_by_accession（来自 Uniprot 工具）
UniProt_get_sequence_by_accession（来自 Uniprot 工具）
UniProt_get_subcellular_location_by_accession（来源：Uniprot 工具）
UniProt_get_uniparc_entry (from Uniprot 工具)
UniProt_get_uniref_cluster (from Uniprot 工具)
UniProt_id_mapping (from Uniprot 工具)
UniProt_search (from Uniprot 工具)
UniProt_search_uniparc (from Uniprot 工具)
UniProt_search_uniref (from Uniprot 工具)

UniProtRefTool (6 tools)¶

本地工具：

UniProtRef_get_disease (from Uniprot Ref Tools)
UniProtRef_get_keyword (from Uniprot Ref Tools)
UniProtRef_get_proteome (from Uniprot Ref Tools)
UniProtRef_search_diseases (from Uniprot Ref Tools)
UniProtRef_search_keywords (from Uniprot Ref Tools)
UniProtRef_search_proteomes (from Uniprot Ref Tools)

UniProtTaxonomyTool (2 tools)¶

本地工具：

UniProtTaxonomy_get_taxon (from Uniprot Taxonomy Tools)
UniProtTaxonomy_search (from Uniprot Taxonomy Tools)

UniRefTool (2 tools)¶

本地工具：

UniRef_get_cluster (from Uniref Tools)
UniRef_search_clusters (from Uniref Tools)

UnpaywallTool (2 tools)¶

本地工具：

Unpaywall_check_oa_status（来自 Unpaywall 工具）
Unpaywall_get_full_text_url (from Unpaywall 工具)

UsageTipsTool (1 tools)¶

本地工具：

ToolUniverse_get_usage_tips (from 专用工具)

VDJDBTool (3 tools)¶

本地工具：

VDJDB_get_antigen_specificity (from Vdjdb Tools)
VDJDB_get_database_summary (from Vdjdb Tools)
VDJDB_search_cdr3 (from Vdjdb Tools)

WFGYPromptBundleTool (1 tools)¶

本地工具：

WFGY_triage_llm_rag_failure (from Wfgy Promptbundle Tools)

WHOGuidelineFullTextTool (1 tools)¶

本地工具：

WHO_指南_全文 (来源：统一指南工具)

WHOGuidelinesTool (1 tools)¶

本地工具：

WHO_Guidelines_Search (from 统一指南工具)

WebAPIDocumentationSearchTool (1 tools)¶

本地工具：

web_api_documentation_search (from Web Search Tools)

WebSearchTool (1 tools)¶

本地工具：

web_search (from Web Search Tools)

WikiPathwaysExtTool (2 tools)¶

本地工具：

WikiPathways_find_pathways_by_gene (from Wikipathways Ext Tools)
WikiPathways_get_pathway_genes (from Wikipathways Ext Tools)

WikiPathwaysGetTool (1 tools)¶

本地工具：

WikiPathways_get_pathway (from Wikipathways Tools)

WikiPathwaysSearchTool (1 tools)¶

本地工具：

WikiPathways_search (from Wikipathways Tools)

WikidataSPARQLTool（1 个工具）¶

本地工具：

Wikidata_SPARQL_query（来自 Wikidata Sparql 工具）

WikipediaContentTool (1 tools)¶

本地工具：

Wikipedia_get_content (from Wikipedia Tools)

WikipediaSearchTool (1 tools)¶

本地工具：

Wikipedia_search (from Wikipedia Tools)

WikipediaSummaryTool (1 tools)¶

本地工具：

Wikipedia_get_summary (from Wikipedia Tools)

WoRMSRESTTool (1 tools)¶

本地工具：

WoRMS_search_species (from Worms Tools)

WormBaseTool (3 tools)¶

本地工具：

WormBase_get_expression (from Wormbase Tools)
WormBase_get_gene (from Wormbase Tools)
WormBase_get_phenotypes (from Wormbase Tools)

XML工具（19个工具）¶

本地工具：

drugbank_filter_drugs_by_name（来自 Xml 工具）
drugbank_get_drug_basic_info_by_drug_name_or_id (from Xml 工具)
drugbank_get_drug_chemistry_by_drug_name_or_drugbank_id（来源：Xml 工具）
drugbank_get_drug_desc_pharmacology_by_moa (from Xml 工具)
drugbank_get_drug_interactions_by_drug_name_or_id (from Xml 工具)
drugbank_get_drug_name_and_description_by_indication（来自：Xml 工具）
drugbank_get_drug_name_and_description_by_pathway_name（来源：Xml 工具）
drugbank_get_drug_name_and_description_by_target_name（来源：Xml 工具）
drugbank_get_drug_products_by_name_or_drugbank_id（来自：Xml 工具）
drugbank_get_drug_references_by_drug_name_or_id (from Xml 工具)
drugbank_get_indications_by_drug_name_or_drugbank_id（来源：Xml 工具）
drugbank_get_pathways_reactions_by_drug_or_id (from Xml 工具)
drugbank_get_pharmacology_by_drug_name_or_drugbank_id（来自：Xml 工具）
drugbank_get_safety_by_drug_name_or_drugbank_id（来源：Xml 工具）
drugbank_get_targets_by_drug_name_or_drugbank_id（来自 Xml 工具）
mesh_get_subjects_by_pharmacological_action（来自 Xml 工具）
mesh_get_subjects_by_subject_id（来自 Xml 工具）
mesh_get_subjects_by_subject_name（来自 Xml 工具）
mesh_get_subjects_by_subject_scope_or_definition（来自 Xml 工具）

XenbaseTool (2 tools)¶

本地工具：

Xenbase_get_gene (from Xenbase Tools)
Xenbase_search_genes (from Xenbase Tools)

ZenodoRESTTool (5 tools)¶

本地工具：

Zenodo_get_license (from Zenodo 工具)
Zenodo_get_record (from Zenodo 工具)
Zenodo_get_record_files (from Zenodo 工具)
Zenodo_list_licenses (from Zenodo 工具)
Zenodo_search_records（来源：Zenodo 工具）

ZincTool (5 tools)¶

本地工具：

ZINC_get_compound (from Zinc Tools)
ZINC_get_purchasable (from Zinc Tools)
ZINC_search_by_properties (from Zinc Tools)
ZINC_search_by_smiles (from Zinc Tools)
ZINC_search_compounds (from Zinc Tools)

dbSNPGetFrequencies (1 tools)¶

本地工具：

dbsnp_get_frequencies (from Dbsnp Tools)

dbSNPGetVariantByRsID (1 tools)¶

本地工具：

dbsnp_get_variant_by_rsid (from Dbsnp Tools)

dbSNPSearchByGene (1 tools)¶

本地工具：

dbsnp_search_by_gene (from Dbsnp Tools)

gnomADGetGeneConstraints (1 tools)¶

本地工具：

gnomad_get_gene_constraints (from Gnomad Tools)

gnomADGraphQLQueryTool (9 tools)¶

本地工具：

gnomad_get_gene (from Gnomad Tools)
gnomad_get_region (from Gnomad Tools)
gnomad_get_sv_by_gene (from Gnomad Tools)
gnomad_get_sv_by_region (from Gnomad Tools)
gnomad_get_sv_detail (from Gnomad Tools)
gnomad_get_transcript (from Gnomad Tools)
gnomad_get_variant (from Gnomad Tools)
gnomad_search_genes (from Gnomad Tools)
gnomad_search_variants (from Gnomad Tools)

iPTMnetTool (4 tools)¶

本地工具：

iPTMnet_get_proteoforms (from Iptmnet Tools)
iPTMnet_get_ptm_ppi (from Iptmnet Tools)
iPTMnet_get_ptm_sites (from Iptmnet Tools)
iPTMnet_search (from Iptmnet Tools)

miRNAGetTool (6 tools)¶

本地工具：

LNCipedia_get_lncrna (from Lncrna Tools)
LNCipedia_get_lncrna_publications (from Lncrna Tools)
LNCipedia_get_lncrna_xrefs (from Lncrna Tools)
miRBase_get_mirna (from Mirna Tools)
miRBase_get_mirna_publications (from Mirna Tools)
miRBase_get_mirna_xrefs (from Mirna Tools)

miRNASearchTool (3 tools)¶

本地工具：

LNCipedia_search_lncrna (from Lncrna Tools)
LNCipedia_search_ncrna_by_type (from Lncrna Tools)
miRBase_search_mirna (from Mirna Tools)

快速工具搜索¶

使用浏览器的搜索功能（Ctrl+F / Cmd+F）快速查找：

工具名称：搜索准确的工具名称
文件路径：搜索 filename.json 以查找该文件中的所有工具
工具类型：搜索特定的工具类型，例如“AgenticTool”、“OpenTarget”等。

备注

每个配置文件都有其专属页面，包含详细的工具信息和可折叠的部分。

可用工具¶

工具注册表¶

本地工具¶

远程工具¶

概述¶

本地工具¶

Broken_Apis Tools¶

软件包工具¶

内置工具¶

远程工具¶

按类型分类的工具¶

ADAStandardsTool (3 tools)¶

**ADMETAITool**（9 个工具）¶

AHAACCGuidelineTool (4 tools)¶

AOPWikiDetailTool (1 tools)¶

AOPWikiListTool (1 tools)¶

APPRISTool (3 tools)¶

ARCHS4Tool (2 tools)¶

AddgeneTool (3 tools)¶

AgenticTool (50 tools)¶

AgingCohortSearchTool (1 tools)¶

AllenBrainTool (4 tools)¶

AllianceGenomeTool (21 tools)¶

**AlphaFoldRESTTool**（3 个工具）¶

AlphaMissenseTool (3 tools)¶

ArXivPDFSnippetsTool (1 tools)¶

**ArXivTool**（1 个工具）¶

ArrayExpressRESTTool (4 tools)¶

BRENDATool (5 tools)¶

BVBRCTool (13 tools)¶

BaseRESTTool (243 tools)¶

BgeeTool (3 tools)¶

BiGGModelsTool (7 tools)¶

BinaryDownloadTool (1 tools)¶

BindingDBTool (5 tools)¶

BioGRIDRESTTool (4 tools)¶

BioImageArchiveTool (3 tools)¶

BioModelsRESTTool (5 tools)¶

BioPortalTool (4 tools)¶

BioRxivTool (2 tools)¶

BioSamplesTool (3 tools)¶

BioStudiesRESTTool (4 tools)¶

BioregistryTool (3 tools)¶

BridgeDbTool (3 tools)¶

CADDTool (3 tools)¶

CATHTool (4 tools)¶

CBioPortalRESTTool (13 tools)¶

CDCRESTTool (2 tools)¶

CELLxGENECensusTool (7 tools)¶

CIViCTool (12 tools)¶

CMAGuidelinesTool (1 tools)¶

CODTool (2 tools)¶

COSMICTool (2 tools)¶

CPICGetRecommendationsTool (1 tools)¶

CPICListGuidelinesTool (1 tools)¶

CPICSearchPairsTool (2 tools)¶

CTDTool (5 tools)¶

CTFPHCListGuidelinesTool (1 tools)¶

CTFPHCSearchGuidelinesTool (1 tools)¶

CancerPrognosisTool (4 tools)¶

CancerVarTool (1 tools)¶

CellMarkerTool (4 tools)¶

CellPaintingTool (3 tools)¶

CellosaurusGetCellLineInfoTool (1 tools)¶

CellosaurusQueryConverterTool (1 tools)¶

CellosaurusSearchTool (1 tools)¶

CellxGeneDiscoveryTool (3 tools)¶

ChEBITool (3 tools)¶

ChEMBLRESTTool (28 tools)¶

**ChEMBLTool**（1 个工具）¶

ChIPAtlasTool (4 tools)¶

ChemComputeTool (1 tools)¶

ClinGenARTool (2 tools)¶

ClinGenAlleleTool (2 tools)¶

ClinGenDosageTool (2 tools)¶

ClinGenTool (8 tools)¶

ClinVarGetClinicalSignificance (1 tools)¶

ClinVarGetVariantDetails (1 tools)¶

ClinVarSearchVariants (1 tools)¶

**ClinicalTrialsDetailsTool**（9 个工具）¶

ADMETAITool（9 个工具）¶

AlphaFoldRESTTool（3 个工具）¶

ArXivTool（1 个工具）¶

ChEMBLTool（1 个工具）¶

ClinicalTrialsDetailsTool（9 个工具）¶

ClinicalTrialsSearchTool（1 个工具）¶

CoreTool（1 个工具）¶

DBLPTool（1 个工具）¶

DOAJTool（1 个工具）¶

DatasetTool（7 个工具）¶

疾病靶点评分工具（10个工具）¶

EFOTool（1 个工具）¶

EmbeddingSync（2 个工具）¶

EnrichrTool（1 个工具）¶