Hmdb Rest

Configuration File: broken_apis/hmdb_rest.json Tool Type: Local Tools Count: 3

This page contains all tools defined in the hmdb_rest.json configuration file.

Available Tools

HMDB_get_diseases (Type: HMDBTool)

Get disease associations for a metabolite from HMDB

HMDB_get_diseases tool specification

Tool Information:

  • Name: HMDB_get_diseases

  • Type: HMDBTool

  • Description: Get disease associations for a metabolite from HMDB

Parameters: No parameters required.

Example Usage:

query = {
    "name": "HMDB_get_diseases",
    "arguments": {
    }
}
result = tu.run(query)

HMDB_get_metabolite (Type: HMDBTool)

Get metabolite data directly from HMDB API by HMDB ID

HMDB_get_metabolite tool specification

Tool Information:

  • Name: HMDB_get_metabolite

  • Type: HMDBTool

  • Description: Get metabolite data directly from HMDB API by HMDB ID

Parameters: No parameters required.

Example Usage:

query = {
    "name": "HMDB_get_metabolite",
    "arguments": {
    }
}
result = tu.run(query)

HMDB_search (Type: HMDBTool)

Search HMDB metabolites by name or formula

HMDB_search tool specification

Tool Information:

  • Name: HMDB_search

  • Type: HMDBTool

  • Description: Search HMDB metabolites by name or formula

Parameters: No parameters required.

Example Usage:

query = {
    "name": "HMDB_search",
    "arguments": {
    }
}
result = tu.run(query)