Aopwiki Tools

Configuration File: aopwiki_tools.json Tool Type: Local Tools Count: 2

This page contains all tools defined in the aopwiki_tools.json configuration file.

Available Tools

AOPWiki_get_aop (Type: AOPWikiDetailTool)

Get detailed information about a specific Adverse Outcome Pathway (AOP) from AOPWiki by AOP ID. R…

AOPWiki_get_aop tool specification

Tool Information:

  • Name: AOPWiki_get_aop

  • Type: AOPWikiDetailTool

  • Description: Get detailed information about a specific Adverse Outcome Pathway (AOP) from AOPWiki by AOP ID. Returns the molecular initiating events (MIEs), key events (KEs), adverse outcomes (AOs), stressors (chemicals), and key event relationships (causal chain).

Parameters:

  • aop_id (integer) (required) AOP numeric identifier. Find IDs using AOPWiki_list_aops. Example: 3 (mitochondrial complex I inhibition leading to parkinsonian motor deficits).

Example Usage:

query = {
    "name": "AOPWiki_get_aop",
    "arguments": {
        "aop_id": 10
    }
}
result = tu.run(query)

AOPWiki_list_aops (Type: AOPWikiListTool)

List Adverse Outcome Pathways (AOPs) from AOPWiki. Returns AOP IDs, titles, and short names. AOPs…

AOPWiki_list_aops tool specification

Tool Information:

  • Name: AOPWiki_list_aops

  • Type: AOPWikiListTool

  • Description: List Adverse Outcome Pathways (AOPs) from AOPWiki. Returns AOP IDs, titles, and short names. AOPs describe causal chains from molecular initiating events through key events to adverse outcomes, used in toxicology and risk assessment.

Parameters:

No parameters required.

Example Usage:

query = {
    "name": "AOPWiki_list_aops",
    "arguments": {
    }
}
result = tu.run(query)