Gsa Tools#

Configuration File: gsa_tools.json Tool Type: Local Tools Count: 1

This page contains all tools defined in the gsa_tools.json configuration file.

Available Tools#

GSA_get_accession (Type: GSATool)#

Look up a GSA (Genome Sequence Archive) accession by its CRA-format ID. GSA, run by China’s Natio…

GSA_get_accession tool specification

Tool Information:

  • Name: GSA_get_accession

  • Type: GSATool

  • Description: Look up a GSA (Genome Sequence Archive) accession by its CRA-format ID. GSA, run by China’s National Genomics Data Center, is a major raw-sequencing archive alongside NCBI SRA/EBI ENA/DDBJ for a large and growing share of Chinese-origin genomic datasets. Returns title, linked BioProject accession, associated publication (title/journal/DOI/PubMed ID), file count/size, and direct HTTPS/FTP download URLs. Example: accession=’CRA002926’ returns a gynecological-mucosal-melanoma sequencing dataset linked to its Frontiers in Oncology publication.

Parameters:

  • accession (string) (required) GSA accession, e.g. ‘CRA002926’.

Example Usage:

query = {
    "name": "GSA_get_accession",
    "arguments": {
        "accession": "example_value"
    }
}
result = tu.run(query)