Allen Cell Types Tools#

Configuration File: allen_cell_types_tools.json Tool Type: Local Tools Count: 1

This page contains all tools defined in the allen_cell_types_tools.json configuration file.

Available Tools#

AllenCellTypes_search_specimens (Type: AllenCellTypesSpecimensTool)#

Search Allen Cell Types neuron specimens with exact RMA row pagination. Filter by donor species a…

AllenCellTypes_search_specimens tool specification

Tool Information:

  • Name: AllenCellTypes_search_specimens

  • Type: AllenCellTypesSpecimensTool

  • Description: Search Allen Cell Types neuron specimens with exact RMA row pagination. Filter by donor species and/or brain structure; metadata reports total_available, has_more and next_start_row so records after the default page remain reachable. Returns electrophysiology, donor, structure and reconstruction metadata.

Parameters:

  • species ([‘string’, ‘null’]) (optional) Donor species: ‘Homo Sapiens’ or ‘Mus musculus’.

  • structure ([‘string’, ‘null’]) (optional) Brain structure name substring, e.g. ‘frontal gyrus’, ‘visual cortex’.

  • limit (integer) (optional) Specimens per page (1-2000).

  • start_row (integer) (optional) Zero-based RMA offset. Continue with metadata.next_start_row.

Example Usage:

query = {
    "name": "AllenCellTypes_search_specimens",
    "arguments": {
    }
}
result = tu.run(query)