"""
humanbase_ppi_analysis
Retrieve tissue-specific protein-protein interactions and biological processes from HumanBase. Re...
"""
from typing import Any, Optional, Callable
from ._shared_client import get_shared_client
[docs]
def humanbase_ppi_analysis(
gene_list: list[Any],
tissue: str,
max_node: int,
interaction: str,
string_mode: bool,
*,
stream_callback: Optional[Callable[[str], None]] = None,
use_cache: bool = False,
validate: bool = True,
) -> Any:
"""
Retrieve tissue-specific protein-protein interactions and biological processes from HumanBase. Re...
Parameters
----------
gene_list : list[Any]
List of gene names or symbols to analyze for protein-protein interactions. Th...
tissue : str
Tissue type for tissue-specific interactions. Examples: 'brain', 'heart', 'li...
max_node : int
Maximum number of nodes to retrieve in the interaction network. Warning: the ...
interaction : str
Specific interaction type to filter by. Available types: 'co-expression', 'in...
string_mode : bool
Whether to return the result in string mode. If True, the result will be a st...
stream_callback : Callable, optional
Callback for streaming output
use_cache : bool, default False
Enable caching
validate : bool, default True
Validate parameters
Returns
-------
Any
"""
# Handle mutable defaults to avoid B006 linting error
return get_shared_client().run_one_function(
{
"name": "humanbase_ppi_analysis",
"arguments": {
"gene_list": gene_list,
"tissue": tissue,
"max_node": max_node,
"interaction": interaction,
"string_mode": string_mode,
},
},
stream_callback=stream_callback,
use_cache=use_cache,
validate=validate,
)
__all__ = ["humanbase_ppi_analysis"]