tooluniverse.tools.get_sequence_by_pdb_id module

get_sequence_by_pdb_id

Retrieve amino acid or nucleotide sequence of polymer entities for a given PDB structure.

tooluniverse.tools.get_sequence_by_pdb_id.get_sequence_by_pdb_id(pdb_id, *, stream_callback=None, use_cache=False, validate=True)[source]

Retrieve amino acid or nucleotide sequence of polymer entities for a given PDB structure.

Parameters:

  • pdb_id (str) – 4-character RCSB PDB ID

  • stream_callback (Callable, optional) – Callback for streaming output

  • use_cache (bool, default False) – Enable caching

  • validate (bool, default True) – Validate parameters

Return type:

dict[str, Any]