"""
gwas_search_studies
Search for GWAS studies by various criteria including EFO trait, disease trait, cohort, GxE inter...
"""
from typing import Any, Optional, Callable
from ._shared_client import get_shared_client
[docs]
def gwas_search_studies(
efo_trait: Optional[str] = None,
disease_trait: Optional[str] = None,
cohort: Optional[str] = None,
gxe: Optional[bool] = None,
full_pvalue_set: Optional[bool] = None,
size: Optional[int] = None,
page: Optional[int] = None,
*,
stream_callback: Optional[Callable[[str], None]] = None,
use_cache: bool = False,
validate: bool = True,
) -> dict[str, Any]:
"""
Search for GWAS studies by various criteria including EFO trait, disease trait, cohort, GxE inter...
Parameters
----------
efo_trait : str
EFO trait identifier or name
disease_trait : str
Disease trait name
cohort : str
Cohort name (e.g., 'UKB' for UK Biobank)
gxe : bool
Filter for Gene-by-Environment interaction studies
full_pvalue_set : bool
Filter for studies with full summary statistics
size : int
Number of results to return
page : int
Page number for pagination
stream_callback : Callable, optional
Callback for streaming output
use_cache : bool, default False
Enable caching
validate : bool, default True
Validate parameters
Returns
-------
dict[str, Any]
"""
# Handle mutable defaults to avoid B006 linting error
return get_shared_client().run_one_function(
{
"name": "gwas_search_studies",
"arguments": {
"efo_trait": efo_trait,
"disease_trait": disease_trait,
"cohort": cohort,
"gxe": gxe,
"full_pvalue_set": full_pvalue_set,
"size": size,
"page": page,
},
},
stream_callback=stream_callback,
use_cache=use_cache,
validate=validate,
)
__all__ = ["gwas_search_studies"]
