Source code for tooluniverse.tools.expression_atlas_disease_target_score

"""
expression_atlas_disease_target_score

Extract disease-target association scores from Expression Atlas. This provides gene expression data.
"""

from typing import Any, Optional, Callable
from ._shared_client import get_shared_client


[docs] def expression_atlas_disease_target_score( efoId: str, pageSize: int, *, stream_callback: Optional[Callable[[str], None]] = None, use_cache: bool = False, validate: bool = True, ) -> dict[str, Any]: """ Extract disease-target association scores from Expression Atlas. This provides gene expression data. Parameters ---------- efoId : str The EFO (Experimental Factor Ontology) ID of the disease, e.g., 'EFO_0000339'... pageSize : int Number of results per page (default: 100, max: 100) stream_callback : Callable, optional Callback for streaming output use_cache : bool, default False Enable caching validate : bool, default True Validate parameters Returns ------- dict[str, Any] """ # Handle mutable defaults to avoid B006 linting error return get_shared_client().run_one_function( { "name": "expression_atlas_disease_target_score", "arguments": {"efoId": efoId, "pageSize": pageSize}, }, stream_callback=stream_callback, use_cache=use_cache, validate=validate, )
__all__ = ["expression_atlas_disease_target_score"]