tooluniverse.tools.PubTator3_EntityAutocomplete module

PubTator3_EntityAutocomplete

Provides suggestions for the best‐matching standardized PubTator IDs for a partial biomedical ter…

tooluniverse.tools.PubTator3_EntityAutocomplete.PubTator3_EntityAutocomplete(text, entity_type, max_results, *, stream_callback=None, use_cache=False, validate=True)[source]

Provides suggestions for the best‐matching standardized PubTator IDs for a partial biomedical ter…

Parameters:

  • text (str) – A few characters or the full name of the biomedical concept you are trying to…

  • entity_type (str) – Optional filter to restrict suggestions to a single category such as GENE, DI…

  • max_results (int) – Maximum number of suggestions to return (1 - 50, default = 10).

  • stream_callback (Callable, optional) – Callback for streaming output

  • use_cache (bool, default False) – Enable caching

  • validate (bool, default True) – Validate parameters

Return type:

Any