tooluniverse.tools.HPA_get_rna_expression_by_source module

HPA_get_rna_expression_by_source

Get RNA expression level (nTPM) for a gene in a specific biological source using optimized column…

tooluniverse.tools.HPA_get_rna_expression_by_source.HPA_get_rna_expression_by_source(gene_name, source_type, source_name, *, stream_callback=None, use_cache=False, validate=True)[source]

Get RNA expression level (nTPM) for a gene in a specific biological source using optimized column…

Parameters:

  • gene_name (str) – Gene name or gene symbol, e.g., ‘GFAP’, ‘TP53’, ‘BRCA1’, etc.

  • source_type (str) – The type of biological source. Choose from: ‘tissue’, ‘blood’, ‘brain’, ‘sing…

  • source_name (str) – The specific name of the biological source, e.g., ‘liver’, ‘heart_muscle’, ‘t…

  • stream_callback (Callable, optional) – Callback for streaming output

  • use_cache (bool, default False) – Enable caching

  • validate (bool, default True) – Validate parameters

Return type:

Any