tooluniverse.tools.Ensembl_lookup_gene_by_symbol module

Ensembl_lookup_gene_by_symbol

Lookup Ensembl gene by species and gene symbol, returning core metadata and coordinates (uses /xr…

tooluniverse.tools.Ensembl_lookup_gene_by_symbol.Ensembl_lookup_gene_by_symbol(symbol, species='homo_sapiens', *, stream_callback=None, use_cache=False, validate=True)[source]

Lookup Ensembl gene by species and gene symbol, returning core metadata and coordinates (uses /xr…

Parameters:

  • species (str) – Species name (e.g., ‘homo_sapiens’).

  • symbol (str) – Gene symbol (e.g., BRCA1).

  • stream_callback (Callable, optional) – Callback for streaming output

  • use_cache (bool, default False) – Enable caching

  • validate (bool, default True) – Validate parameters

Return type:

dict[str, Any]