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🚀 Getting Started

  • Quick Start
  • Installation
  • Getting Started with ToolUniverse

🤖 Building AI Scientists

  • Building AI Scientists
    • Claude Desktop
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💡 Use ToolUniverse

  • Tutorial Navigation
  • AI-Tool Interaction Protocol
  • Tool Loading Tutorial
  • Tool Listing Tutorial
  • Tool Finder Tutorial
  • Tool Caller Tutorial
  • MCP Support
  • Coding API - Typed Functions
  • Case Study: Hypercholesterolemia Drug Discovery
  • Agentic Tools Tutorial
  • Literature Search Tools Tutorial
  • Wide Research Web UI Tutorial
  • Clinical Guidelines Tools
  • Tool Composition Tutorial
  • Scientific Workflows
  • Human Expert Feedback
  • Post-processing Tool Outputs
    • SummarizationHook
    • FileSaveHook
    • Hook Configuration
    • Server and Stdio Hook Integration

🔨 Add Tools to ToolUniverse

  • Navigation
  • Create Your First Tool
  • Local Tools
    • Local Tools Tutorial
    • Step 1: Your First Tool (Simplest Example)
    • Step 2: Adding Parameters
    • Step 3: Adding Input Validation
    • Step 4: Complete Real Example
    • Common Scenarios
    • Troubleshooting
    • Next Steps
  • Remote Tools
    • Remote Tools Tutorial
    • MCP Integration
  • Contributing to ToolUniverse
    • Contributing Local Tools to ToolUniverse
    • Contributing Remote Tools to ToolUniverse
  • ToolUniverse Architecture
  • Documentation Deployment

🔧 Tools

  • Available Tools
    • Bioinformatics Core Tools
    • Cheminformatics Tools
    • Earth Sciences Tools
    • Genomics Tools
    • Image Processing Tools
    • Machine Learning Tools
    • Neuroscience Tools
    • Physics Astronomy Tools
    • Scientific Computing Tools
    • Single Cell Tools
    • Structural Biology Tools
    • Visualization Tools
    • Admetai Tools
    • Adverse Event Tools
    • Agentic Tools
    • Alphafold Tools
    • Arxiv Tools
    • Biorxiv Tools
    • Boltz Tools
    • Cellosaurus Tools
    • Chembl Tools
    • Clinicaltrials Gov Tools
    • Compose Tools
    • Core Tools
    • Crossref Tools
    • Dailymed Tools
    • Dataset Tools
    • Dblp Tools
    • Disease Target Score Tools
    • Doaj Tools
    • Drug Discovery Agents
    • Efo Tools
    • Embedding Tools
    • Enrichr Tools
    • Europe Pmc Tools
    • Expert Feedback Tools
    • Fatcat Tools
    • Fda Drug Adverse Event Tools
    • Fda Drug Labeling Tools
    • Finder Tools
    • Gene Ontology Tools
    • Genomics Tools
    • Geo Tools
    • Gwas Tools
    • Hal Tools
    • Hpa Tools
    • Humanbase Tools
    • Idmap Tools
    • Literature Search Tools
    • Markitdown Tools
    • Mcp Client Tools Example
    • Medlineplus Tools
    • Medrxiv Tools
    • Molecule 2D Tools
    • Molecule 3D Tools
    • Monarch Tools
    • Odphp Tools
    • Openaire Tools
    • Openalex Tools
    • Opentarget Tools
    • Osf Preprints Tools
    • Output Summarization Tools
    • Pmc Tools
    • Ppi Tools
    • Protein Structure 3D Tools
    • Pubchem Tools
    • Pubmed Tools
    • Pubtator Tools
    • Rcsb Pdb Tools
    • Reactome Tools
    • Semantic Scholar Tools
    • Special Tools
    • Tool Composition Tools
    • Txagent Client Tools
    • Unified Guideline Tools
    • Uniprot Tools
    • Unpaywall Tools
    • Url Fetch Tools
    • Uspto Downloader Tools
    • Uspto Tools
    • Wikidata Sparql Tools
    • Xml Tools
    • Zenodo Tools
    • Boltz Tools
    • Depmap Tools
    • Expert Feedback Tools
    • Immune Compass Tools
    • Pinnacle Tools
    • Transcriptformer Tools
    • Uspto Downloader Tools
  • Remote Tools Setup
    • Boltz2 Tool Setup
    • DepMap Gene Correlation Analysis Tool - MCP Server
    • Human Expert Feedback System
    • COMPASS Immunotherapy Treatment Prediction Tool - MCP Server
    • PINNACLE Protein-Protein Interaction Tool
    • Transcriptformer Gene Embedding Tool
    • USPTO Downloader Tool Setup

🔌 API

  • API Reference
    • tooluniverse package
      • tooluniverse.compose_scripts package
        • tooluniverse.compose_scripts.biomarker_discovery module
        • tooluniverse.compose_scripts.comprehensive_drug_discovery module
        • tooluniverse.compose_scripts.drug_safety_analyzer module
        • tooluniverse.compose_scripts.literature_tool module
        • tooluniverse.compose_scripts.output_summarizer module
        • tooluniverse.compose_scripts.tool_description_optimizer module
        • tooluniverse.compose_scripts.tool_discover module
        • tooluniverse.compose_scripts.tool_graph_composer module
        • tooluniverse.compose_scripts.tool_graph_generation module
        • tooluniverse.compose_scripts.tool_metadata_generator module
      • tooluniverse.admetai_tool module
      • tooluniverse.agentic_tool module
      • tooluniverse.alphafold_tool module
      • tooluniverse.arxiv_tool module
      • tooluniverse.base_tool module
      • tooluniverse.biorxiv_tool module
      • tooluniverse.boltz_tool module
      • tooluniverse.chem_tool module
      • tooluniverse.compose_tool module
      • tooluniverse.core_tool module
      • tooluniverse.crossref_tool module
      • tooluniverse.ctg_tool module
      • tooluniverse.custom_tool module
      • tooluniverse.dailymed_tool module
      • tooluniverse.dataset_tool module
      • tooluniverse.dblp_tool module
      • tooluniverse.default_config module
      • tooluniverse.doaj_tool module
      • tooluniverse.efo_tool module
      • tooluniverse.embedding_database module
      • tooluniverse.embedding_sync module
      • tooluniverse.enrichr_tool module
      • tooluniverse.europe_pmc_tool module
      • tooluniverse.execute_function module
      • tooluniverse.extended_hooks module
      • tooluniverse.fatcat_tool module
      • tooluniverse.gene_ontology_tool module
      • tooluniverse.graphql_tool module
      • tooluniverse.gwas_tool module
      • tooluniverse.hal_tool module
      • tooluniverse.hpa_tool module
      • tooluniverse.humanbase_tool module
      • tooluniverse.llm_clients module
      • tooluniverse.logging_config module
      • tooluniverse.mcp_client_tool module
      • tooluniverse.mcp_integration module
      • tooluniverse.mcp_tool_registry module
      • tooluniverse.medlineplus_tool module
      • tooluniverse.medrxiv_tool module
      • tooluniverse.memory_manager module
      • tooluniverse.odphp_tool module
      • tooluniverse.openaire_tool module
      • tooluniverse.openalex_tool module
      • tooluniverse.openfda_adv_tool module
      • tooluniverse.openfda_tool module
      • tooluniverse.osf_preprints_tool module
      • tooluniverse.output_hook module
      • tooluniverse.package_tool module
      • tooluniverse.pmc_tool module
      • tooluniverse.pubchem_tool module
      • tooluniverse.pubmed_tool module
      • tooluniverse.pubtator_tool module
      • tooluniverse.rcsb_pdb_tool module
      • tooluniverse.reactome_tool module
      • tooluniverse.remote_tool module
      • tooluniverse.restful_tool module
      • tooluniverse.semantic_scholar_tool module
      • tooluniverse.smcp module
      • tooluniverse.smcp_server module
      • tooluniverse.tool_finder_embedding module
      • tooluniverse.tool_finder_keyword module
      • tooluniverse.tool_finder_llm module
      • tooluniverse.tool_graph_web_ui module
      • tooluniverse.tool_registry module
      • tooluniverse.unified_guideline_tools module
      • tooluniverse.uniprot_tool module
      • tooluniverse.unpaywall_tool module
      • tooluniverse.url_tool module
      • tooluniverse.uspto_tool module
      • tooluniverse.utils module
      • tooluniverse.wikidata_sparql_tool module
      • tooluniverse.xml_tool module
      • tooluniverse.zenodo_tool module
    • tooluniverse.execute_function module
    • tooluniverse.cache package
      • tooluniverse.cache.memory_cache module
      • tooluniverse.cache.result_cache_manager module
      • tooluniverse.cache.sqlite_backend module
    • tooluniverse.space package
    • tooluniverse.base_tool module
    • tooluniverse.core_tool module
    • tooluniverse.exceptions module
    • tooluniverse.tool_registry module
    • tooluniverse.logging_config module
    • tooluniverse.utils module
    • tooluniverse.default_config module
    • tooluniverse.agentic_tool module
    • tooluniverse.remote_tool module
    • tooluniverse.compose_tool module
    • tooluniverse.tool_finder_embedding module
    • tooluniverse.tool_finder_keyword module
    • tooluniverse.tool_finder_llm module
    • tooluniverse.smcp module
    • tooluniverse.smcp_server module
    • tooluniverse.mcp_client_tool module
    • tooluniverse.mcp_integration module
    • tooluniverse.mcp_tool_registry module
    • tooluniverse.embedding_database module
    • tooluniverse.embedding_sync module
    • tooluniverse.output_hook module

❓ Reference

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On this page

  • Submodules
  1. ToolUniverse /
  2. API Reference /
  3. tooluniverse.cache package

tooluniverse.cache package¶

Cache utilities for ToolUniverse.

Submodules¶

  • tooluniverse.cache.memory_cache module
  • tooluniverse.cache.result_cache_manager module
  • tooluniverse.cache.sqlite_backend module
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