Source code for tooluniverse.tools.GWAS_search_associations_by_gene

"""
GWAS_search_associations_by_gene

Search GWAS Catalog associations by gene name (returns strongest risk allele and p-value fields).
"""

from typing import Any, Optional, Callable
from ._shared_client import get_shared_client


[docs] def GWAS_search_associations_by_gene( gene_name: str, size: Optional[int] = 5, *, stream_callback: Optional[Callable[[str], None]] = None, use_cache: bool = False, validate: bool = True, ) -> dict[str, Any]: """ Search GWAS Catalog associations by gene name (returns strongest risk allele and p-value fields). Parameters ---------- gene_name : str Gene symbol (e.g., BRCA1). size : int Max associations to return. stream_callback : Callable, optional Callback for streaming output use_cache : bool, default False Enable caching validate : bool, default True Validate parameters Returns ------- dict[str, Any] """ # Handle mutable defaults to avoid B006 linting error return get_shared_client().run_one_function( { "name": "GWAS_search_associations_by_gene", "arguments": {"gene_name": gene_name, "size": size}, }, stream_callback=stream_callback, use_cache=use_cache, validate=validate, )
__all__ = ["GWAS_search_associations_by_gene"]