"""
GO_get_annotations_for_gene
Finds all GO annotations for a specific gene/protein using GOlr search.
"""
from typing import Any, Optional, Callable
from ._shared_client import get_shared_client
[docs]
def GO_get_annotations_for_gene(
gene_id: str,
rows: Optional[int] = 100,
*,
stream_callback: Optional[Callable[[str], None]] = None,
use_cache: bool = False,
validate: bool = True,
) -> list[Any]:
"""
Finds all GO annotations for a specific gene/protein using GOlr search.
Parameters
----------
gene_id : str
A gene identifier such as gene symbol (e.g., 'TP53') or database ID.
rows : int
Maximum number of annotations to return. Default: 100. Use a lower value (e.g...
stream_callback : Callable, optional
Callback for streaming output
use_cache : bool, default False
Enable caching
validate : bool, default True
Validate parameters
Returns
-------
list[Any]
"""
# Handle mutable defaults to avoid B006 linting error
# Strip None values so optional parameters don't trigger schema validation errors
_args = {
k: v for k, v in {"gene_id": gene_id, "rows": rows}.items() if v is not None
}
return get_shared_client().run_one_function(
{
"name": "GO_get_annotations_for_gene",
"arguments": _args,
},
stream_callback=stream_callback,
use_cache=use_cache,
validate=validate,
)
__all__ = ["GO_get_annotations_for_gene"]
